Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2342 ATGGCAGCACACAGAGTTATCATCATAGCATCACTTCTCTTCTGTTTAGCCGGAACTTGTTATGGGAAAGTTCTCTTCTCTTCCTTGAAGAAAACCCTTGATGTCACTGCTTCCCCCAAACATGGACAAGTTGTGGAAGCTGGATTGGACACTATCACTGTGACATGGGCTCTGAACAAGACCTTACCAGCTGGAACAGATTCTTCCTACAAAACCATAAAGGTGAAGCTGTGCTACGCGCCGATAAGTCAACAAGACCGCGCGTGGAGAAAGACAGAGGACGAGCTCTCCAGGGACAAGACATGCCAGCACAAGATTGTGGCCAAGCCCTACGATGCATCCAACAAAACAGTGCACACCTTCGAGTGGTTGATTGAGAGGGACGTGCCTGAAGCCACGTACTTCGTACGCGCCTATGCTCTTGACTCCAACGACGTGCAAGTGGGTTATGGTCAAACCAGTGATGCTAAGAAGACAAGTAACTTGTTCAAGATCCAGGCAATCACCGGGCGACACCTGTCGCTTGATATATGCTCTGCTTGTTTCAGTGCCTTCTCAGTGGTGTCCCTGATTTTCTTCTTCTATATTGAGAAGAGAAAGAAACATTAA 609 0.4762 MAAHRVIIIASLLFCLAGTCYGKVLFSSLKKTLDVTASPKHGQVVEAGLDTITVTWALNKTLPAGTDSSYKTIKVKLCYAPISQQDRAWRKTEDELSRDKTCQHKIVAKPYDASNKTVHTFEWLIERDVPEATYFVRAYALDSNDVQVGYGQTSDAKKTSNLFKIQAITGRHLSLDICSACFSAFSVVSLIFFFYIEKRKKH* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2342 202 Pfam High-affinity nitrate transporter accessory, Ig-like domain 26 170 IPR016605 GO:0010167|GO:0015706
Lja4g2342 202 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 3.2 1 201 - -
Lja4g2342 202 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 3.2 1 201 IPR016605 GO:0010167|GO:0015706
Lja4g2342 202 PIRSF NAR2 1 202 IPR016605 GO:0010167|GO:0015706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2342 - - gmx:100794996 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2342 4 25885244 25886484 Lja4g2342 4 25885244 25886484 ECH