Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2341 ATGGAGCGAAGGTTTAGCAGAGAAAGCAAAAGGCCTGTGAGCCTACAAAAGAAAGTGGCGGAGACAAAGCGCAAGGAAGAATTACCGCCACCGGACCTCACCGATTTCATGAACGACATGTTCTTTGGTGCAGCAGACATGGAGAGAAAAACTTATGACCTCACAGGTAGTGTCCGAGGTATGAATGACGATGATGACAACGAAGCCGGTTTCGATGACAGCACTAGAAGTAACAGCGCAAGGTTGACACAAGAGTGGTTGCAAGAGGCTCGACGCGTCGTAGCTTCCTCTCCTTCACGCTGCGAATCTCCAGGACGCCTTTCAGGGTCCCCAAGGTTCGCAGCCGCACAATCTGCAGGGTCACCCCTCCATTCCTTGGATCGAAGAGATGAAATGTCTAGGACTAGGTCAGCCCGAAGGTACAGAGCAGTGGAAGGTGTGAGTGATGAGATACTCTCCAAGACAACAAAACACAGCCGTAACAAATCAGAGACGTTCGCTGAACGTTCGCCGGAAGGGGATGGATCCCCGGCAACGGCGGTGCACAAATGGTTCTCCAACATCCTCAAACCTCCTCCCAATAGCAACAACAACAGCCCGCCGCCACAACCACTACCACAAACACCGCCTTCTCCCGATTTTCTCCCTCCGCGGCAACCGTTTTCTCGGAAGTCCCGCTTCCAATCTGAGCCCCCAGCTGCTGCTTCACCTCACAAACTGGGGATTCCAGCTCCTGTTTCGCGGCGGACGTTCAAGAGTTCTGTGCCGCTGTCGCCGACGGCAGAGAATGCGAACCGTCCCGGTTCTCTTCCCCTGTCACCGCCGAGGAATCTAGTGGAATCCGCTCACCGGAGAACTTTATCTTCTTCCACGTGCTCGCGGGAGAAGATCGCGCCTACTAGGCATGTTGGGAAAGGAGAGGAAGTAACACGAGAGCAGAGCCTCAATGGATTCCTCAAAGAGCAGAGGAGTTTGCTCCAGAAAATCTCCAACAGAGAGCTTCGTGCCCATGCCAAAATCGTGCTCTCTGGGACTTCCAACAGTACGGCGTCGATGGTGGCTGCTATTTGCCACGCGTGGCTGTTGGCTTACAGACAGAGAGAGAACGACGGTGGTACAGGTGACGGCGTGGTGGTGGTGGTGCCTGTGATGAATGTGAAGCGAGGCTCAATGTTGAAGCTAAGACAGGCTGCATGGCTCTTTCACCATGCTGGTGTTGATGCCACTGCATTGCTTTTTTCTGATGAGGTTGACATGGAAAGCCTTTTGGTGACTGGCCAACTGAGTGTCCTCGTGGTTGGACAAGATGTCTTAAGCACCACTAGCGAGGTTGGATCTCAATGCACCATTCTAACCGATAATTACTGTGAGGATGCCTATGATCTACTTGACAACCCTGTCCTGAAGAAATTATTGCTTGCTGGTATTCTGCTAGACACACAGAATCTAAGAGCTTCTGCAACAATATCCATGACAAGAGATGCAGAGGCAGTTCAATTGCTATTAGTTGGCTCACCCCCAAACTACAGATATGCTTTATATGATCAATTGATGCAAGACCAAAAAGGTACTTCTTTTGTTGAAGCATTGAACCATAACTATGGGAGGCCTCATGAGGAAAGTGACCAAAACAGTGAAGGACAGCATAAGAGAAGGTCAAGCTCTACATCTGAGCGTGACATCATCATGTCAAGTTCAAAAACAAGCTCCATAGACACAAAAGTTAAGCTTATTACGCCACCTATTCAATCTCCTAGTCCAGCACCAGCACCAGTACCAGCAAATGCTGCAGAAAGGGAAAACTCTCGTGGGAAAAACACGTTCTTCTTGGCAAGGTGGTTTGGTTTTGGTTCAAAATGA 1860 0.5022 MERRFSRESKRPVSLQKKVAETKRKEELPPPDLTDFMNDMFFGAADMERKTYDLTGSVRGMNDDDDNEAGFDDSTRSNSARLTQEWLQEARRVVASSPSRCESPGRLSGSPRFAAAQSAGSPLHSLDRRDEMSRTRSARRYRAVEGVSDEILSKTTKHSRNKSETFAERSPEGDGSPATAVHKWFSNILKPPPNSNNNSPPPQPLPQTPPSPDFLPPRQPFSRKSRFQSEPPAAASPHKLGIPAPVSRRTFKSSVPLSPTAENANRPGSLPLSPPRNLVESAHRRTLSSSTCSREKIAPTRHVGKGEEVTREQSLNGFLKEQRSLLQKISNRELRAHAKIVLSGTSNSTASMVAAICHAWLLAYRQRENDGGTGDGVVVVVPVMNVKRGSMLKLRQAAWLFHHAGVDATALLFSDEVDMESLLVTGQLSVLVVGQDVLSTTSEVGSQCTILTDNYCEDAYDLLDNPVLKKLLLAGILLDTQNLRASATISMTRDAEAVQLLLVGSPPNYRYALYDQLMQDQKGTSFVEALNHNYGRPHEESDQNSEGQHKRRSSSTSERDIIMSSSKTSSIDTKVKLITPPIQSPSPAPAPVPANAAERENSRGKNTFFLARWFGFGSK* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2341 619 MobiDBLite consensus disorder prediction 93 294 - -
Lja4g2341 619 MobiDBLite consensus disorder prediction 558 580 - -
Lja4g2341 619 MobiDBLite consensus disorder prediction 251 267 - -
Lja4g2341 619 MobiDBLite consensus disorder prediction 194 217 - -
Lja4g2341 619 PANTHER - 8 617 - -
Lja4g2341 619 MobiDBLite consensus disorder prediction 57 80 - -
Lja4g2341 619 MobiDBLite consensus disorder prediction 534 603 - -
Lja4g2341 619 MobiDBLite consensus disorder prediction 1 32 - -
Lja4g2341 619 SUPERFAMILY DHH phosphoesterases 435 535 IPR038763 -
Lja4g2341 619 Gene3D - 309 443 - -
Lja4g2341 619 PANTHER BNIP - RELATED 8 617 - -
Lja4g2341 619 MobiDBLite consensus disorder prediction 124 169 - -
Lja4g2341 619 MobiDBLite consensus disorder prediction 534 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2341 Lja-Chr4 25876758 25880452 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2341 - - lja:Lj4g3v1415280.1 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2341 4 25876758 25880452 Lja4g2341 4 25876758 25880452 ECH