Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2340 ATGATCAAGAATATGCAGGACTCAATTGGGATTCCTGCTTGCTTTTCTTCTGCTGAAAAGCTCAGTGAAGAACATGGAGGAGCTGTGACCCGTTCAGGCCAGAGTGTCTACATGTCTGTGTACAGAACAAAGGTTGCTGATCACTGCCGTTTGATCACCATCACATGGTGCAAAAATCTGCTACTTCATGGCCTATCAGTATCAGTAGAAGGCCCAGAAGGAGAATCACAGTACAATTGCAAGGTTGAGCTGAAGCCATGGTACTTTTGGAGGAAACAAGGTTCCAAGCGATTCATAATAGATGGTACTAAAGCTGTTGATGTTTTCTGGGACCTTAAAGGTGCAAAGTTCAACGGAGAAACAGAGCCAATCTCAGAGTACTATGTAGCAGTGGTTTGTGATGATGAGGTTGTGCTTCTTCTTGGTGATCTGAAGAAAGAGGCTTACAGAAGAACAGGGTGCAGGCCAGCACTGATTGATCCCATTTTGGTTTCTAAAAAGGAACACATTTTTGGGAAGAAGAGGTTCAGCACTAGAGCTAAGTTTCATGAGAAGGGTAGGTGGCATGAGATCTCAATCGAGTGCAAGAGCAGGGGAAGAAGCTTCAGCAATGGCGATTCTGGGGTTCAGCCAGAGATGGAGATAAGGATTGATGGGCATTTGGTGATTCATGTGAAGCACTTGCAATGGAAGTTCAGAGGGAATGAGTCAATTCGTCTCAGCAAGATGAGAGTGGAGGTATATTGGGATGTTCATGATTGGCTTTTTAGTCCTGGTTTAAAGCATGCTTTGTTTATTTTTAAGCCTGTTTTGTCATCCACATCATCCCTGCCATCTTGTTCATCACCTTTATCATCAGTATCTTCTCCATTATCTGCTCAGACAATGAGTTCTGAATCAGTGGAAGGCTTTAGTGTTAGTGGGTCTTCAGAGTTTTGTTTGTTTCTTTATGCTTGGAAGGTTGAATGA 969 0.4324 MIKNMQDSIGIPACFSSAEKLSEEHGGAVTRSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSVSVEGPEGESQYNCKVELKPWYFWRKQGSKRFIIDGTKAVDVFWDLKGAKFNGETEPISEYYVAVVCDDEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKKRFSTRAKFHEKGRWHEISIECKSRGRSFSNGDSGVQPEMEIRIDGHLVIHVKHLQWKFRGNESIRLSKMRVEVYWDVHDWLFSPGLKHALFIFKPVLSSTSSLPSCSSPLSSVSSPLSAQTMSSESVEGFSVSGSSEFCLFLYAWKVE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2340 322 Pfam Plant protein of unknown function (DUF868) 32 320 IPR008586 -
Lja4g2340 322 PANTHER OS01G0909400 PROTEIN 5 322 - -
Lja4g2340 322 PANTHER EXPRESSED PROTEIN 5 322 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2340 Lja-Chr4 25874286 25875635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2340 11 322 EF-hand Containing Proteins AT5G28150 37.975 7.06e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2340 - - lja:Lj4g3v1415290.1 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2340 4 25874286 25875635 Lja4g2340 4 25874286 25875635 ECH