Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2325 ATGGCAAGAACCACTTTAGCTTTACTTGTTACTCTAAAACTGCTGATTATTTTCATATGTGCAGGTTGGGTTACTCTTTGGTTTCTGAAGCCAACCCAAGTATGGACCAAAAAATGGAAACATGCAGAACAAAGTGCCAGTAACACAGTTTTTGGATACTATGGTCTTAACTTCACTGTTTACACATTTCCAATAATTGCTATTGCTATAATTGGACTTCTTTTCCTGGATTTGAAAGCTGGATATCAAAGAAGCAGAGGTGCAAGGAGGTCATCAATTGTCTTCTCAAATCCACTAGTGGTGAACAGTCTATTGGGAATCTTATCCAGTGTTGAAATACTGGTAGCTTTCTTTTTTGTCCTCTTCTTGGCATGGACATATTACTCTCGCATCTCTAGTGATTTCAAGAAGTTGAAGCCAGACAAGTCACTGAACTTGAACATATGGCAACTCATGTATCTCAGAGTAGCAACCAGGTTTGGCCTTCTATCAGAAGCATGCCTGGCTTTGCTTCTTCTTCCAATTTTGAGGGGGTTAGCTCTATTTCGCATACTTGGCATTCAATTAGAAGCTTCAATCAGGTATCACACCTGGGTTGGAACTGCAATGATACTTTTTGCTACAATACATGGTGCCAGCACTTTGTTTATCTGGGGGGTCAGCAACCATATACAGCATGAGATTTTGAAGTGGCAGAAGACAGGACGTATATACCTTGCTGGGGAGATTGCACTTGTTATTGGGCTAGTTATCTGGGTTACCTCACTTCCCCAAATCAGAAGAAGAAAGTTTGAAATTTTCTACTACACACATCATTTGTATGCAGTCTTTCTAGTATTTTTCTTGTTCCATGCTGGGGATAAGCACTTCTACACGGTCTTCCCAGGAATATTCCTTTTCAGCCTTGACAAACTGCTCCGAATCATTCAATCACATCCAAAAACTTGCATGGTTTCTGCCAGAATTTTTCCCTGCAAAGCTGTGGAGCTAATTCTGCCCAAAGATCCAAGGCTGAAGTATAACCCTACTAGTGTTATGTTTTTGAAGATAGCAACCATATCTCATCTTCAGTGGCATTCTTTCAGTATAATATCTAGTTCCAAAGCTGATGACCACACGATGTCTGTGATAATCAAATGTCAAGGGTCATGGACTAACACTCTTTATGACCTGATACAAGCTGAACTAAACAAAGGTGCTGACAAGAGGAAGGGTATACCTGTTGCAATTGAAGGACCTTATGGTCCAGCTTCATTTGACTATTTAAAATATGACAGCTTACTTCTGGTTGCTGGAGGAAGTGGAATAACCCCATTTCTGAGCATTTTGGCAGAAGTTGATTCAGCTGCCAGCAGAAACAGATTTCCCTTGAGAATACAACTTGTATATGTCATAAAGAAGGCACAAGACTTTTCTCTGTTACATTCAATCTCACACATGTTACTCAAAGAATCAACTGAAAATTTTCATTTGAATCTAAAATTGTTTGTAACACAAGAAACACAAGAAGGGATGGGTATTAGGGAGCTATTTCATGAGCTGTTTAAAGTAAGAACCCTGGAATTGAACAGTTTTTGTTCAAGTTATGCAGCACATGGACCTGAAAGTCCAGCTTGGATGGCTGCCATTGCTGGATTTTGCTCCCTCACTTTCCTTATTTTCCTTATCATGTTCAACCATATTATAATTCCATCTGAAAAGCCCTCCAAATTGTCCAAAGTCAAGACTGCCTCTTGGGTTGTGGATCTAGTTCTGATAGCTGCTTTTGTCCTAGCTTTGGCTTGTAGCACCTTGGTAGCAGTTATCTTGAGATGTAGAAGGCTGAAAAAAGGGATTCAACCAATATCCCAGAAGGAAATTGAACCCCTTCATCGTTCAGCTGAAACTAGCAATGCTCTTGAAGAACATGAAGTCCATTTTGGGAAAAGGCCTGACTTTAAAGATATATGCAGCAAGTTCCGGAGGGAAACCAGTGGATCTAATATTGGAGTTTTGGTTTGTGGACCTGAGACCATGAAGGAATCTGTGGCATCTGCATGCCAGCAAAAGTCTCAGTGTTTCAAGTTATGTGTGAAGACAACAGAACCCAGCTTCACTTTCCACTCTCTCAACTTCACACTTTAG 2124 0.403 MARTTLALLVTLKLLIIFICAGWVTLWFLKPTQVWTKKWKHAEQSASNTVFGYYGLNFTVYTFPIIAIAIIGLLFLDLKAGYQRSRGARRSSIVFSNPLVVNSLLGILSSVEILVAFFFVLFLAWTYYSRISSDFKKLKPDKSLNLNIWQLMYLRVATRFGLLSEACLALLLLPILRGLALFRILGIQLEASIRYHTWVGTAMILFATIHGASTLFIWGVSNHIQHEILKWQKTGRIYLAGEIALVIGLVIWVTSLPQIRRRKFEIFYYTHHLYAVFLVFFLFHAGDKHFYTVFPGIFLFSLDKLLRIIQSHPKTCMVSARIFPCKAVELILPKDPRLKYNPTSVMFLKIATISHLQWHSFSIISSSKADDHTMSVIIKCQGSWTNTLYDLIQAELNKGADKRKGIPVAIEGPYGPASFDYLKYDSLLLVAGGSGITPFLSILAEVDSAASRNRFPLRIQLVYVIKKAQDFSLLHSISHMLLKESTENFHLNLKLFVTQETQEGMGIRELFHELFKVRTLELNSFCSSYAAHGPESPAWMAAIAGFCSLTFLIFLIMFNHIIIPSEKPSKLSKVKTASWVVDLVLIAAFVLALACSTLVAVILRCRRLKKGIQPISQKEIEPLHRSAETSNALEEHEVHFGKRPDFKDICSKFRRETSGSNIGVLVCGPETMKESVASACQQKSQCFKLCVKTTEPSFTFHSLNFTL* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2325 707 Gene3D - 579 705 IPR039261 -
Lja4g2325 707 Gene3D - 408 537 IPR039261 -
Lja4g2325 707 Pfam FAD-binding domain 318 418 IPR013112 GO:0016491
Lja4g2325 707 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 301 420 IPR017927 GO:0016491
Lja4g2325 707 PANTHER FERRIC REDUCTION OXIDASE 8, MITOCHONDRIAL 7 706 - -
Lja4g2325 707 Pfam Ferric reductase like transmembrane component 161 281 IPR013130 -
Lja4g2325 707 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 408 521 IPR039261 -
Lja4g2325 707 CDD NOX_Duox_like_FAD_NADP 318 499 - -
Lja4g2325 707 Pfam Ferric reductase NAD binding domain 424 681 IPR013121 GO:0016491
Lja4g2325 707 SFLD Ferric Reductase Domain 31 706 - -
Lja4g2325 707 PANTHER NADPH OXIDASE 7 706 - -
Lja4g2325 707 SFLD Ferric reductase subgroup (FRE) 10 705 - -
Lja4g2325 707 SUPERFAMILY Riboflavin synthase domain-like 320 416 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2325 Lja-Chr4 25745620 25749354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2325 181 707 Miscellaneous Gene Families AT5G50160 48.195 2.52e-178 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2325 K00521 - gmx:100816560 1066.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2325 4 25745620 25749354 Lja4g2325 4 25745620 25749354 ECH