Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2321 ATGAAGGGAAACCCTAACCCTAAGCCGGAAGAAGAAGAGAAGCGCCTACAAGAGGAGCTCCTCGGACCGATCCTAGTAGCAGAGCGCGTCATCAAACTAGCGGAGGAAGCAGAGTCATCCAAAACCGTCTGCAGGGAGCTCGCCACCAAGGTCCAAATCCTCTGCGAAAATCTCCGAGCGGTGGTTCGCGCCGTGTCAGCCAACCCCTCTCTCAACGAGAGGCCGATCCGCCGCATGGCCGCCGACGTCTCCAAATGCCTCGACAAGACGCTGTCGCTCGTCCGGAAATGCAGGAAGCAACCCGGCGTGCTCCGGCACGTGTGGTCGATGAGGACCACCGGGGACTTACGAAAAGTCTGGAGTCTTCTAGAGTCTTCCAATGGTGACATGATGTGGCTTCTCAGCATCTTTGAGTCTAAAGGGACTAACCTCTCGCTTCCTCCGATTGCGAGCAATGATCCGATTTTGGCATGGGTGTGGACATACACGTATACTCTCCAATTGGGTAGCGCCAAGGATCGAGCTGAAGCTGCTACTGGGTTAGGTTCTCTTGCTAGAGACAATGACCGGAACAAGTTCATCATCATGGAGGAAGGTGGGGTTTTACCTCTTATCAAGCTTCTTAAGGATTCTGCTTACCCTGATGCTCAGGTCGCGGCTGCGAATGCTCTTGTCAATATAGCTTCGAATCAACTCGGTGTGGTTCGGTTCCTGCTTCCCAGCCTTGCTGTCCCTGCCATTGTTCAGGTTCTGTCCGATTCGCCGTTTAGAGTTCGTGTTTCCGTTGCGAGTTTAGTCTCCACCATGGCTGACCAGGACCCCGTTGCTCGCGAGGAGTTTGCGCGGGCAAATGTGACTAGACCTCTGGTGTCGTTGTTGGCGATGGATACTGTCCTTGCCAACCCCATGGCGGCTCGAACCAGCAGCATTCATTCCCTGGTTGTTAATTTGTCCGAGGGAAATTTGAATGCTGCTGGTGGAAGAGGGGGTCAGCAGAATAGAAGGGATAGGGAGAAGGAAGGTGAGAGCGCGGAGTTGAGAAATGCTGTTAAAACTAGCTGTGCTGAGGCTCTGTGGAAACTCTCTAAAGGGTGTCTCTTGACCTGCAAGAAGATTAGCGAGACTAAAGGTTTGCTTTGTCTGGCTAAGATTGTGGAGTCCGAGAGCGGAGATTTGCGGTTCAATTGTCTCATGGCTGTCATGGAGATTGCTGCCGTGGCGGAGTCCAATGCTGAACTTAGAAGAGTTGCTTTCAAGCCCAACACAACGGCAGCGAAGGCGGTTTTGGATCAGCTCTTGAGGGTGGTTTGTGAGGAGAGCGATTCTGCCTTGCTGGTTCCTGCCATTAAGTCTATTGGCTCCTTGGCCAGAAACTTCCCAGGAAAGGTTCCTCAAGTTATTGGCCCCTTAGTTGCCCAGCTTGGCAACAGAGATATAGATGTTGCGAGTGAAGCTGCGATTGCATTGGCAAAGTTTGTGTGCCCGGAAAATTACAACTGCGTTGAGCATTCGAAGGTAATACTTGAGCTTGATGGAATCCCCAAGCTTATGAGTCTGCTGCAGATAAATGATCGGCAGCAAGTGTATGGCCTGAAGTTACTATGTTACCTTGCCTTAAACGTAGGGGATAGTAAGATTCTTGAGGAGGAACGTACCTTGAGTACTCTAGAGAAGCTTGCTCGTCCTGTTCTATCTCAACATCCTGATTTGAAGGAACTGCTTGCAAAGGCCATACACCACCTCACTCTTTATCAGTCTGGGGCTCAGTTGCACAGACAGCCTTTGGGACTATAG 1794 0.5139 MKGNPNPKPEEEEKRLQEELLGPILVAERVIKLAEEAESSKTVCRELATKVQILCENLRAVVRAVSANPSLNERPIRRMAADVSKCLDKTLSLVRKCRKQPGVLRHVWSMRTTGDLRKVWSLLESSNGDMMWLLSIFESKGTNLSLPPIASNDPILAWVWTYTYTLQLGSAKDRAEAATGLGSLARDNDRNKFIIMEEGGVLPLIKLLKDSAYPDAQVAAANALVNIASNQLGVVRFLLPSLAVPAIVQVLSDSPFRVRVSVASLVSTMADQDPVAREEFARANVTRPLVSLLAMDTVLANPMAARTSSIHSLVVNLSEGNLNAAGGRGGQQNRRDREKEGESAELRNAVKTSCAEALWKLSKGCLLTCKKISETKGLLCLAKIVESESGDLRFNCLMAVMEIAAVAESNAELRRVAFKPNTTAAKAVLDQLLRVVCEESDSALLVPAIKSIGSLARNFPGKVPQVIGPLVAQLGNRDIDVASEAAIALAKFVCPENYNCVEHSKVILELDGIPKLMSLLQINDRQQVYGLKLLCYLALNVGDSKILEEERTLSTLEKLARPVLSQHPDLKELLAKAIHHLTLYQSGAQLHRQPLGL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2321 597 MobiDBLite consensus disorder prediction 324 344 - -
Lja4g2321 597 SUPERFAMILY ARM repeat 171 584 IPR016024 -
Lja4g2321 597 Gene3D - 163 327 IPR011989 -
Lja4g2321 597 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 199 231 IPR000225 GO:0005515
Lja4g2321 597 Pfam Armadillo/beta-catenin-like repeat 188 229 IPR000225 GO:0005515
Lja4g2321 597 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 11 595 - -
Lja4g2321 597 Gene3D - 19 136 IPR036537 GO:0007166
Lja4g2321 597 Gene3D - 339 593 IPR011989 -
Lja4g2321 597 PANTHER ARMADILLO REPEAT ONLY 4 11 595 - -
Lja4g2321 597 SMART arm_5 500 539 IPR000225 GO:0005515
Lja4g2321 597 SMART arm_5 187 229 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2321 Lja-Chr4 25714033 25716273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2321 - - gmx:100813824 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2321 4 25714033 25716273 Lja4g2321 4 25714033 25716273 ECH