Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2315 ATGGCAGAGCCTTATCAGCAAGAAGACTACTACTACAACCACACAGGCACCCAATCACGAACAGGGAAGCCAAATCCTACTACTTCTCAGGTTCTAGCACTCGCCACTCTTGTCCCATTCGGAGCTTCTCTCCTCATCCTCGCCGGCCTCACCCTTGCCGCCACCGTCATCGGCCTCACCATCACCGCCCCGCTCTTCGTCATCTTCAGCCCCATCTTGCTCCCGGCAGCCCTGCTCATCGGTTTAGCCGTCGCAGGGTTTGTAACATCTGGGGCATTCGGGGTCACCTCTCTCTCTTCGTTTGCTTGGCTGGCAAACTACCTCCGCCGCACGCGGTTGCTGGAGCGCCTCAAACCGCCGCTTCAGGCGGCTGCCGAGACCATGGCCCAGAGAGCTGGGGAAGTTGTTGAAAGTGTGGAGAGCAAAGCCCAGGAGATGGCCCAGGCGGCCCAGAGCGAGGCCCGTGACGATGGAAAAGCAGCCCAAACTGAGAGCAGGGTCAGAAAAACGGGCCTGGACGTCCAGAGTGATTCTCGTGAAGCAGCAAAAGCCTAG 555 0.5892 MAEPYQQEDYYYNHTGTQSRTGKPNPTTSQVLALATLVPFGASLLILAGLTLAATVIGLTITAPLFVIFSPILLPAALLIGLAVAGFVTSGAFGVTSLSSFAWLANYLRRTRLLERLKPPLQAAAETMAQRAGEVVESVESKAQEMAQAAQSEARDDGKAAQTESRVRKTGLDVQSDSREAAKA* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2315 184 MobiDBLite consensus disorder prediction 157 184 - -
Lja4g2315 184 Pfam Oleosin 29 140 IPR000136 GO:0012511|GO:0016021
Lja4g2315 184 PANTHER OLEOSIN 17 168 IPR000136 GO:0012511|GO:0016021
Lja4g2315 184 MobiDBLite consensus disorder prediction 136 184 - -
Lja4g2315 184 PANTHER OLEOSIN 5 17 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2315 Lja-Chr4 25591019 25591943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2315 25 170 Lipid Metabolism Gene Families AT3G01570 44.371 1.76e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2315 - - aprc:113874847 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2315 4 25591019 25591943 Lja4g2315 4 25591019 25591943 ECH