Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2312 ATGGCTTCTTCCCCTGCTCAATTCGAAGAACAACAGGAGTTTGATTTTGGCGGCGAAATTGCTGGAGCGCGCTCAGGTAACAAGAGGTCATCTCCTGAATTTGATGGTGGAGATTTCGATAAGGATCACAAGAAGGTGAAATTGGTCAAACCGAATGGTGAAGAAGCTTCTTCTGGTGTCACCACTGGAATGATCTTGACTCTCCGTGACAGTCTTCAGAACTGTCAGGATACGCTTGAGGCATGCCAGAATGAACTTGATGCTGCAAGATCTGAGATTCAGAAGTGGCGCACTTCATTTCAGAATGAACCTTTCATACCAGCTGGGGTCCCTCCTGCTCCCAAATTGGTGATTAATTATTTTCAAGCTCTTAAGTCAAATGAAGAGTCTTTAAGAGACCAGCTTGAAAAGGCAAAGAAAAAGGAAGCTGCATTAATTGTAACATATGCAAAACGGGAACAAGAGATAGCAGCGTTGAAGTCTGCTGTACGGGACTTGAAAGCTCAACTCAAGCCAGCATCAATGCAGGCAAGGAGGTTGTTACTGGATCCAGCGGTTCATGAAGAGTTCATACGATTAAAGAATTTAGTTGAGGAAAAGGACAAAAAAGTAAAGGAGCTGCAGGATAACATTGCTGCTGTTAATTTTACTCCCCAAAGCAAGATGGGGAAAATACTCATGGCAAAATGTAGAACCCTGCAAGAGGAAAATGAGGAGATCGGGAATCAAGCTTCTGAGGGCAAGATCCATGACTTGGCAATGAAACTTTCATTGCAGAAATACCAGAATGCAGAACTCAGAAGTCAATTTGAAGGTTTGCAGAAGCGTTTGGGTGGATTGACAAATGATGTGGACAGATCCCATGAAACGCTTTTTATGTTGCAAGAGAAATTAGAAGAGAAGAATCAGGAGATCCAAAGACTGAAAGCTGAGTTGCAACAAGAAAGCTGCATGGAGAACGGGAGCACAGAAGCAGCAGCTAATGGGAAAGATAATGGTGAGATGATACCTGCGGAAGACGCTAACTAA 1029 0.4334 MASSPAQFEEQQEFDFGGEIAGARSGNKRSSPEFDGGDFDKDHKKVKLVKPNGEEASSGVTTGMILTLRDSLQNCQDTLEACQNELDAARSEIQKWRTSFQNEPFIPAGVPPAPKLVINYFQALKSNEESLRDQLEKAKKKEAALIVTYAKREQEIAALKSAVRDLKAQLKPASMQARRLLLDPAVHEEFIRLKNLVEEKDKKVKELQDNIAAVNFTPQSKMGKILMAKCRTLQEENEEIGNQASEGKIHDLAMKLSLQKYQNAELRSQFEGLQKRLGGLTNDVDRSHETLFMLQEKLEEKNQEIQRLKAELQQESCMENGSTEAAANGKDNGEMIPAEDAN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2312 342 Coils Coil 190 210 - -
Lja4g2312 342 MobiDBLite consensus disorder prediction 1 46 - -
Lja4g2312 342 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 4 320 - -
Lja4g2312 342 Coils Coil 65 99 - -
Lja4g2312 342 Coils Coil 263 283 - -
Lja4g2312 342 MobiDBLite consensus disorder prediction 31 46 - -
Lja4g2312 342 MobiDBLite consensus disorder prediction 314 342 - -
Lja4g2312 342 Coils Coil 291 318 - -
Lja4g2312 342 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 4 320 IPR033757 GO:0000381|GO:0005634|GO:0080009
Lja4g2312 342 Coils Coil 149 169 - -
Lja4g2312 342 Coils Coil 121 141 - -
Lja4g2312 342 Pfam WTAP/Mum2p family 137 291 IPR033757 GO:0000381|GO:0005634|GO:0080009
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2312 Lja-Chr4 25529337 25534457 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2312 K22824 - gmx:100776997 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2312 4 25529337 25534457 Lja4g2312 4 25529337 25534457 ECH