Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2310 ATGGAGTCTCCAACCTCTGTCTGCGACACAGAGATCCCTCTTCAAACGCAAACCATCGATTCCTTCACCGCTTCTCACGCCAAATCTCTTCAATCCCTCAGAGACACTGCACAACAAACCGCTCAACACAGAGTTCAATTGGAAGAGGTTAAAGGCAAACTCAGGGAAGCGGAGGATGATTTGGTCAAAGCACTCTCAGTTAAGACTCGTAAAGAGGCCAGGCGAATGGCTTTGTTGGATGCTATTGCCTCTGCTAAGTCTAGAGTTGATGAACTCAGCACAAGTGTTCAGGAGCACCGAGCCAAAACGCAGGAGTATGCTGCTTTTCTATCTCAACAATCTCTTGCTCTGGCAGCATCTGAAGGGAAGTTAAATGAATGCATTGAGCAGAAAGATGAAACTCAGGAGGCCATGTCTTGGTACAACAGGGTCCTTGGCTTTCATGTCAAAGGGGGACGTGGGGTAAAATTCACATTCAAGAATATAAATTTGAACAATCCAAATGAGGAGTATTTTTTTACTATCTTCCATCAAAACAATACTTACACGTTGTTAAACTGTGAACCTTCCACCGATGACATCAAAGAGTTGATCCATGAATTAAACAAGACAAATGATCTGTTTAAATTTGTCAGAGTAATGAGAAAGAAGTTCCAAGAAGCAGTGGGGCAAGATGTTACTACCAGGGGTCAAGTTGCACATGAAGAATCTGCATTTATCTCTGCATCTGCTCCAGTCTTATCAATGTCATCTGTTAGAAGTGATTCTACAACCAAGGAAAATGAGCACCGAGATGAACCTGCGGAGGGTGATACACAAATCAAGAAGAAACAATTGCTTCACAGAAGGGTCAAATCAGGAGTTTTATCTCCTGGATCTGCATCATCTGTTCGTCAATCTCCTCGTTTGAAGGCTAGGAAATGA 924 0.4297 MESPTSVCDTEIPLQTQTIDSFTASHAKSLQSLRDTAQQTAQHRVQLEEVKGKLREAEDDLVKALSVKTRKEARRMALLDAIASAKSRVDELSTSVQEHRAKTQEYAAFLSQQSLALAASEGKLNECIEQKDETQEAMSWYNRVLGFHVKGGRGVKFTFKNINLNNPNEEYFFTIFHQNNTYTLLNCEPSTDDIKELIHELNKTNDLFKFVRVMRKKFQEAVGQDVTTRGQVAHEESAFISASAPVLSMSSVRSDSTTKENEHRDEPAEGDTQIKKKQLLHRRVKSGVLSPGSASSVRQSPRLKARK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2310 307 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 6 305 IPR045143 GO:0007059|GO:0031262
Lja4g2310 307 Gene3D Chromosome segregation protein Spc25 128 226 - -
Lja4g2310 307 MobiDBLite consensus disorder prediction 250 307 - -
Lja4g2310 307 Coils Coil 40 67 - -
Lja4g2310 307 Coils Coil 82 102 - -
Lja4g2310 307 MobiDBLite consensus disorder prediction 256 277 - -
Lja4g2310 307 PANTHER - 6 305 - -
Lja4g2310 307 Pfam Chromosome segregation protein Spc25 151 219 IPR013255 GO:0007059|GO:0031262
Lja4g2310 307 Coils Coil 117 137 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2310 K11550 - gmx:100776032 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2310 4 25511612 25516142 Lja4g2310 4 25511612 25516142 ECH