Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2306 ATGGACATGAAGGAACATTCAGTTTCCTGGACAAAACACATGAAAGACTCATTTTTTGCAGCTCCCCACACAACAAGACAACACCAATGCATACAAACAACCTCACAAAATCATTCCCTGAAATTGGATTCTTCTACTTCCCAAAATACTCTACTACTACTACCTATGCTACCTTCTGCCTTTGTTGTTTTCTTTCTGCTTGTTACTTCAATTAGTCCAGTTTTGTCACACCCCATTGCCTCAGATTCAGTACTCTCTCACTCCAATGCTACCCAAACTTTTAGGCCAGGTGTGGAGTTGCATAAGTTGAGGAGAATCAGAGCTCTACTGAGGAAGATTAACAAGCCTGCAATCAAGACAATTAAGAGTCCAGATGGGGATTTGATAGATTGTGTTTTATCTCATCAGCAACCAGCTTTTGACCATCCTGAACTCAAAGGAAAAAGACCATTGGATCCACCAGAAAGGCCTAAGAGAAAGAGCAACTTCACCAATGGAGAATCAGTAACAGAAAGTATTCAGCTTTGGACTGTTTCTGGTGAAGTGTGTCCAGAAGGAACTGTTCCAATCAGGAGAACAACAGAGCAGGATTTTCTAAGAGCAAGCTCTATCAGAAGATTTGGAAGAAAACCAAGAGGTGTACGGAGAGATTCATCTGGCACTGGTCATGAGCATGCAGTGGTTTTTGTTAATGGAGATCAATATTATGGAGCCAAAGCAAGCATAAACGTGTGGACACCCACAGTAACTGATCAATACGAATTCAGCTTGTCTCAGATATGGGTTATTGCTGGATCATTTGGTAATGATCTGAATACACTAGAAGCTGGATGGCAGGTTAGTCCTGAGCTATATGGGGACAACTATCCTAGGTTCTTCACTTATTGGACTACTGATGCATATCAAGCCACTGGATGCTACAACTTATTATGTTCAGGATTTGTCCAAACAAACAACAAGATAGCAATAGGAGCTGCAATCTCCCCAAGATCTGCTTATAATGGCAGACAATTTGATATTGGCATAATGGTTTGGAAGGATCCAAAGCATGGACATTGGTGGCTGGAGTTTGGATCAGGACTGTTAGTTGGGTATTGGCCAGCATTCTTGTTCAGTCACTTGAGAAGCCATGCAAGCATGGTTCAATTTGGAGGAGAAATTGTGAATTCCCGTTCAAGGGGTTACCACACTGGCACCCAAATGGGCAGTGGCCATTTTGCTGAAGAAGGTTTTAGAAAAGCAGCTTATTTTAGAAACCTTCAAGTGGTTGATTGGGACAATAACTTGCTTCCTCTCTCAAACATGCACCAATTGGCTGATCATTCCAATTGCTATGACATAAGAGAGGGAAGAAACAATGTTTGGGGGACTTACTTTTACTATGGAGGTCCTGGAAGAAATGTGAGATGTCCATGA 1416 0.4181 MDMKEHSVSWTKHMKDSFFAAPHTTRQHQCIQTTSQNHSLKLDSSTSQNTLLLLPMLPSAFVVFFLLVTSISPVLSHPIASDSVLSHSNATQTFRPGVELHKLRRIRALLRKINKPAIKTIKSPDGDLIDCVLSHQQPAFDHPELKGKRPLDPPERPKRKSNFTNGESVTESIQLWTVSGEVCPEGTVPIRRTTEQDFLRASSIRRFGRKPRGVRRDSSGTGHEHAVVFVNGDQYYGAKASINVWTPTVTDQYEFSLSQIWVIAGSFGNDLNTLEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNKIAIGAAISPRSAYNGRQFDIGIMVWKDPKHGHWWLEFGSGLLVGYWPAFLFSHLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNNLLPLSNMHQLADHSNCYDIREGRNNVWGTYFYYGGPGRNVRCP* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2306 471 PANTHER CARBOXYL-TERMINAL PEPTIDASE 49 471 - -
Lja4g2306 471 MobiDBLite consensus disorder prediction 141 162 - -
Lja4g2306 471 Pfam Neprosin activation peptide 120 228 IPR025521 -
Lja4g2306 471 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 49 471 - -
Lja4g2306 471 Pfam Neprosin 253 464 IPR004314 -
Lja4g2306 471 Gene3D - 246 357 - -
Lja4g2306 471 MobiDBLite consensus disorder prediction 141 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2306 Lja-Chr4 25427797 25431854 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2306 - - gmx:100820129 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2306 4 25427797 25431854 Lja4g2306 4 25427797 25431854 ECH