Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2302 ATGAAGAAGAACGGGACACTGATCGTGGCGGTTAACTTGATGTGTTTGGTCATGGTTCACTGTACGCCGGAAACCCCGTCGTACACGGTGGTCCACTCCGACTCCGATTTCGAGATCAGACTCTACCGGAGCTCCGTCTGGATGTCCGCTCCCGCCGTTGACATAATCTCCTTCGAGAAAGCCACCTGGAATGGCTTCCACAGATTGTTCCAGTTCACACAAGGTGCCAACCTCAATTTCTCTCGGATTCCGATGACTATTCCAATTTTGACAACCCTGGTCGCCGGAGCTGGACCCTTACAATCGCAAGGATACTATGTGAGTCTCTACTTGCCGGTTAATTTTCAGGCCGTGCCGCCGCTTCCGCTGCCGGAACTCGATATCGAGCCGTATGAGTTCAGCTCTCACTGTGTTGCAGTGAGGAAGTTCAATGGATTTGCTAAGGATGAGAGGGTTGTTAAAGAGGCGAAAAGGCTTGCTAACAGTTTGAGTAATTCTCCATGGGCTCATTCGATTTCGTCGGAAAGCTTAGGGGGTTACTCGATTGCGCAGTACAAACCGCCGCTACGGATTGGTAAGCGGAGGAATGAGGTTTGGGTTGATATTGATGCTCCTGAATTGGGGTGTGGGGTGGGTGGTGTTGCAGTGTATTGA 654 0.5107 MKKNGTLIVAVNLMCLVMVHCTPETPSYTVVHSDSDFEIRLYRSSVWMSAPAVDIISFEKATWNGFHRLFQFTQGANLNFSRIPMTIPILTTLVAGAGPLQSQGYYVSLYLPVNFQAVPPLPLPELDIEPYEFSSHCVAVRKFNGFAKDERVVKEAKRLANSLSNSPWAHSISSESLGGYSIAQYKPPLRIGKRRNEVWVDIDAPELGCGVGGVAVY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2302 217 Gene3D Regulatory factor, effector binding domain 23 206 IPR011256 -
Lja4g2302 217 PANTHER SOUL HEME-BINDING PROTEIN-RELATED 7 203 - -
Lja4g2302 217 Pfam SOUL heme-binding protein 24 200 IPR006917 -
Lja4g2302 217 PANTHER HEME-BINDING PROTEIN-RELATED 7 203 IPR006917 -
Lja4g2302 217 SUPERFAMILY Probable bacterial effector-binding domain 13 202 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2302 Lja-Chr4 25377365 25378312 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2302 - - gmx:100306073 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2302 4 25377365 25378312 Lja4g2302 4 25377365 25378312 ECH