Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2287 ATGAGGGAAAAGATCGTGTTGTTTGGAGACTCCATAACAGAGGAATCTTTCGGAGACAAAGGATGGGGTGCTTCTCTTGCCAATGCCTATACTCGCAAGGACACTCCTAAGCAACCTCTTGCTGCCACAGTTTTCTTTGGTGCTAATGATTCAGCTTTGTCAGGAAGAGCCTATGAAAAGCTACATGTACCTATTGAAGAGTACAGACAGAATCTTAGAAAAATTGTTCTACACTTGAAGACATGCTCTCCGTCTATGCTAATTGTGCTTATTACTCCACCTCCAATTTCTGAGGAAGCACGTCTAGCACATTTAAGATCCTTATATGGTGAGAATGCTCCAGAATTGCCTGAAAGAACATATGAAGTAATTGGTCAGTATGCGAAGGCATGTGTTGAGATAGCTAAGGAAATGGGTTTGCCATATATCAATCTGTGGTCTAAATTGCAAGAAACTGATGGCTGGCAAAAGAAATTTTTGAGAGATGGGTTGCACCTGACACCAGAAGGAAATGCAGCAGTGTTCCAAGAAGTAATAAAGGTGTTCAATGAAGAAGGGCTTTGTGCTGATAAAATGCCATATGATTTCCCTGTCTACTCAGAAGTTGATGACAAAAATCCTCAGAGCTCTTTAAGCATTCCATTGGAGTAG 651 0.4117 MREKIVLFGDSITEESFGDKGWGASLANAYTRKDTPKQPLAATVFFGANDSALSGRAYEKLHVPIEEYRQNLRKIVLHLKTCSPSMLIVLITPPPISEEARLAHLRSLYGENAPELPERTYEVIGQYAKACVEIAKEMGLPYINLWSKLQETDGWQKKFLRDGLHLTPEGNAAVFQEVIKVFNEEGLCADKMPYDFPVYSEVDDKNPQSSLSIPLE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2287 216 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED 36 211 - -
Lja4g2287 216 CDD Isoamyl_acetate_hydrolase_like 4 181 - -
Lja4g2287 216 SUPERFAMILY SGNH hydrolase 4 182 - -
Lja4g2287 216 Pfam GDSL-like Lipase/Acylhydrolase family 36 173 IPR013830 -
Lja4g2287 216 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED 1 33 - -
Lja4g2287 216 Gene3D SGNH hydrolase 35 211 IPR036514 -
Lja4g2287 216 Gene3D SGNH hydrolase 2 34 IPR036514 -
Lja4g2287 216 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 36 211 IPR045136 -
Lja4g2287 216 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 33 IPR045136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2287 Lja-Chr4 25248877 25251173 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2287 K23978 - gmx:100782709 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2287 4 25248877 25251173 Lja4g2287 4 25248877 25251173 ECH