Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2255 ATGTTTGTGGCTGGATTAACCAGAAATGTCATCTCTTTTGGTTTATTCATGTCACCTGTGCCTACATTTATAAAAATATGGAAGGCAAAATCAGTGCAAGATTTCAAGCCAGATCCTTATGTGATCACAATTCTGAATTGTGCAATGTGGTCATTCTATGGAATGCCCTTTGTGAGTAAAAATAACATTCTAGTCCTCACAATTAATGGCATTGGCTTCTTCATTGAGATCCTCTACACTCTCATCTTCTTAGTGTACTCAACCTGGAGTAAGCGTAGGAAGATCTTGATGTTCCTGCTGGGTGAAGTCATCTTTCTTGTGATAGTGGTATTTTGTACCATGTACCTTGTTCACTCCCTCAAGCAAAGAAAGTTAATTGTTGGAATTATATGCATAGTCTTCAACATCCTTATGTACTTCTCACCCCTCACTGTCATGCGACAAGTAATTCGAACGAAGAGCGTGAAGTACATGCCTTTCTTGCTTTCACTCACCAACTTCGTCAATGGAGTCGTTTGGACAACATATGCGTGCCTAAAATGGGATCCAAATGTTGCGATTCCCAATGGCTTAGGAGCACTTTCAGGGTTGGCGCAACTCATCCTCTATGCCGTTTACTACCGAACAACCAACTGGGACGAAGGGACACCAGCTCGTGTCAGCGTATGA 669 0.4185 MFVAGLTRNVISFGLFMSPVPTFIKIWKAKSVQDFKPDPYVITILNCAMWSFYGMPFVSKNNILVLTINGIGFFIEILYTLIFLVYSTWSKRRKILMFLLGEVIFLVIVVFCTMYLVHSLKQRKLIVGIICIVFNILMYFSPLTVMRQVIRTKSVKYMPFLLSLTNFVNGVVWTTYACLKWDPNVAIPNGLGALSGLAQLILYAVYYRTTNWDEGTPARVSV* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2255 222 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET5 3 216 - -
Lja4g2255 222 Gene3D - 3 91 - -
Lja4g2255 222 Gene3D - 121 211 - -
Lja4g2255 222 PANTHER RAG1-ACTIVATING PROTEIN 1 3 216 - -
Lja4g2255 222 Pfam Sugar efflux transporter for intercellular exchange 5 88 IPR004316 GO:0016021
Lja4g2255 222 Pfam Sugar efflux transporter for intercellular exchange 126 209 IPR004316 GO:0016021
Lja4g2255 222 Coils Coil 219 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2255 Lja-Chr4 24784171 24786119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2255 3 187 Miscellaneous Gene Families AT5G62850 60.541 8.46e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2255 K15382 - gmx:100810948 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2255 4 24784171 24786119 Lja4g2255 4 24784171 24786119 ECH