Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2246 ATGCGATCCTCTGCCACTCTTCCCTTCACCCTCTTCACTCTCATCCTCATCCCCATCCTCCCCCATGCCCAGGGGCATTCACTACTGTCGCCGTTTCCATCAGCTCTCGAAACCCTCCAGAAACAACTAGGCTACAATTTCAAGACCATTAGTCTCCTTCGTCGCGCGATGACCCACGCTTCATTCTCCGAGGAGAACAACAAAGCATTGAGCATTTTGGGTGCTGCTGTCATTGAAACATCTGCTTCTTTTCACTTGATTTCCAAGGACATTGATATTTCTGCCAAAGAGCTTAACCGTAGATTGTCCCAGGTCTCCAATGTGGAATCTTCCTGTGCTGTTGATGGAGTGCATTTGGGCTTGCACAAGGTGGTTCGAGTCTCGCCTAAGACCAATTCCTCTGCCCCTGCTGTGGTTTGTGGCGCGTTCCGGGCAATTTTTGGTGCTATTGCTATTGATACTGGGAAATCGGATGATGCCGGTAATGTTTTCTGGACCATTCATGGTGTTGGTGATGTTGGGGTTGCTGCAGCATTGTGA 540 0.4944 MRSSATLPFTLFTLILIPILPHAQGHSLLSPFPSALETLQKQLGYNFKTISLLRRAMTHASFSEENNKALSILGAAVIETSASFHLISKDIDISAKELNRRLSQVSNVESSCAVDGVHLGLHKVVRVSPKTNSSAPAVVCGAFRAIFGAIAIDTGKSDDAGNVFWTIHGVGDVGVAAAL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2246 179 SUPERFAMILY RNase III domain-like 30 157 IPR036389 GO:0004525|GO:0006396
Lja4g2246 179 CDD RIBOc 51 158 IPR000999 GO:0004525|GO:0006396
Lja4g2246 179 ProSiteProfiles Ribonuclease III family domain profile. 36 155 IPR000999 GO:0004525|GO:0006396
Lja4g2246 179 Gene3D Ribonuclease III domain 34 169 IPR036389 GO:0004525|GO:0006396
Lja4g2246 179 SMART riboneu5 51 178 IPR000999 GO:0004525|GO:0006396
Lja4g2246 179 Pfam Ribonuclease-III-like 51 157 IPR000999 GO:0004525|GO:0006396
Lja4g2246 179 PANTHER RIBONUCLEASE 3 30 155 - -
Lja4g2246 179 PANTHER RIBONUCLEASE III 30 155 IPR011907 GO:0003723|GO:0004525|GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2246 - - gmx:100527745 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2246 4 24671200 24672432 Lja4g2246 4 24671200 24672432 ECH