Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2225 ATGGTTTTGAACTTGCAGTTTTCTCCGGGGACTTTCATCAAACACCTCACGTCCCGAAAATTCACAACACACTGTTTGCACAAATCCTCCACACCCTCCCTCTCCCACTTCGGAACCCTAACCTCTCGCCAGAAAGACCAGATTCATCTCTACGTCGACGCTCTTCTTCAATGGAACAAGCGTATGAATCTGACAGCAGTTCGAGAAGTGAACCAAGTCATGGAAAGGCACGTGGAGGATTCGCTTGCGATTTTACCTCCGTTGAGCGACTGTTACCGCGCGCACTGCGGTGGTTCTGGCGATAAGCTCAGCCTTGTTGATGTCGGAACCGGCGCGGGCCTCCCCGGAGTAGTTTTGGCCATAGCTCGTCCAGAATGGGATGTGACGCTGCTCGAGTCTATGAACAAGCGATGCGTCTTCTTGGAGCATGTTGTTAGTGTTGTAGGTTCCTCCAACATTCAAGTTGTAAGAGGAAGAGCTGAGAGTTTGGGGCAGAATCCTCGCTTCAGAGAGCAATTTGACGTAGCGGTAGCCAGGGCAGTTGCAGAGATGAGAATATTAGCTGAGTATTGTGTTCCATTTGTTCGAGTGGGTGGGTTGTTTGTTGCTGCCAAGGGTCATGATCCTGAGGATGAAGTTAAGAAAGCTGAAAGCGCCATCCAGAAGCTGGGTGCATCTCTATTGCAAGTACAATCAGTGGAATCGCAAAGCCCATATGGTCAGCGAACTGCTGTCATATGTCTAAAGGATCATCCCACACCGATGAAATATCCCCGTGATCCAGGTACACCAGCTAAAGAACCGTTGTAA 810 0.4963 MVLNLQFSPGTFIKHLTSRKFTTHCLHKSSTPSLSHFGTLTSRQKDQIHLYVDALLQWNKRMNLTAVREVNQVMERHVEDSLAILPPLSDCYRAHCGGSGDKLSLVDVGTGAGLPGVVLAIARPEWDVTLLESMNKRCVFLEHVVSVVGSSNIQVVRGRAESLGQNPRFREQFDVAVARAVAEMRILAEYCVPFVRVGGLFVAAKGHDPEDEVKKAESAIQKLGASLLQVQSVESQSPYGQRTAVICLKDHPTPMKYPRDPGTPAKEPL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2225 269 Pfam rRNA small subunit methyltransferase G 45 235 IPR003682 GO:0005737|GO:0006364|GO:0008649
Lja4g2225 269 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 269 IPR029063 -
Lja4g2225 269 TIGRFAM rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 50 243 IPR003682 GO:0005737|GO:0006364|GO:0008649
Lja4g2225 269 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 37 246 IPR003682 GO:0005737|GO:0006364|GO:0008649
Lja4g2225 269 MobiDBLite consensus disorder prediction 250 269 - -
Lja4g2225 269 CDD AdoMet_MTases 105 183 - -
Lja4g2225 269 Gene3D Vaccinia Virus protein VP39 19 269 IPR029063 -
Lja4g2225 269 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 4 269 IPR003682 GO:0005737|GO:0006364|GO:0008649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2225 K03501 - gmx:100818428 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2225 4 24450988 24454070 Lja4g2225 4 24450988 24454070 ECH