Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2200 ATGGCTACCGGATCATTAATTCGTTTTGTGGAGCATCAACTGGGAAGGATTCCACACTTCTTGTTGTGCATGGTGCTTGAATGGGTGTTGATAATTGTGCTTTTCCTTGATGGGTTTCTTGCGTTTTTCGCCATTGAGTTGGCCAAGTATTTTGAATTGGAAATCCCGTGCTGGCTTTGCGCGAGGATGAATCATGTTCTGGCCTGCAAAACTCCTAATTTCTATTACAACAACTCCATATGTGAGGCTCACAAGAAAGATGTTTCTTCATTGGCTTTCTGTCACAATCACAAGAAGCTATCTGAGATAAGTAAGCTGTGTGACGCGTGCCTACTTTCGTTCGCAACCGGGAAGGAATCAGATTGTGATACCTATAAGTCCCTTGTGGGGGTTCTGAATAAAAATCTGGAGTGCTCTGTGGATAATGGCCAGAATGTTCAATTGAGCTTGAAGGATGATGGGGTCTTACAAGCTGAGAAAAACAGTGCTCAGAGGTGTTCATGCTGTGGAGCACCATTGAAAATCAAGGCTTTCCTTTCACGAGCTCCCACTGCTTCACCAAGAGCTTATCCATGCTTGACACCTAAACATGAGGAATCTCGTAGTCTCGAATGTCCTCTCCTTCGGTATTCGAAACTCAAGTCCATGTCTCAAATTGATTTAGAGCTTCCACAGAACAAGGAAGGTGAAAAAGAAGTTAATCAGAATAATACATTAAGGGAAGAAGACAAAGGTGCCTCTTTGCCTCTATTGACACAAGCCGAGGATTCAAACATTGAATCTCCAAAAACCCCACTTCCATGGAGCAATAGGTTCTTTGGAATCCCACCTGCAGATTCTCCAAACAGCAGTCCAAGATGGTCTAGCGGGCTTAGCAAGAAATCATCACTGGGAAAGACAGAATTTGCCTCTGACTCTAACGAGGTAAATGGTGTAGATGAAGCAGATGACGTTAACAATTTGAAGAGGCAAGTGCATTTGGATCGCAAGTCGCTCATGGCTCTGTACATGGAGTTGGACGAAGAAAGAAGTGCTTCAGCTGTTGCTGCCAACAATGCAATGGCCATGATCACGCGCTTACAGGAAGAGAAGGCAGCTTTACAGATGGATGCTTTGCAGTATCAGAGAATGATGGAAGAGCAGATTGAGTATGATGAAGAAGCCTTGCAAGAATATAATGACATGATTCTCAAACTTGAGGAAGAAACAAAAAATTTGGAAACAGAATTGGGGATCTACAGAGAAAAATATGGATGCCTTACAGAAGATGATTTCAACGAAGCTCACTCATCCCATGGGGGCAATGAAGATAATGAAGAAAAAGACCTCAGCCTTCATCAAGCTGTCTCATCAAAGGCAGAGAACGGAGGGGGAAAGCTCAATGAGTCGCTAAAAGATTTTAGAATGGAGAAAACATATGTTCTTGGCCGGATGAAGAAATCGGAAAGCAGAACTCTCTTGGCAGAGAGTGGAATATGA 1479 0.432 MATGSLIRFVEHQLGRIPHFLLCMVLEWVLIIVLFLDGFLAFFAIELAKYFELEIPCWLCARMNHVLACKTPNFYYNNSICEAHKKDVSSLAFCHNHKKLSEISKLCDACLLSFATGKESDCDTYKSLVGVLNKNLECSVDNGQNVQLSLKDDGVLQAEKNSAQRCSCCGAPLKIKAFLSRAPTASPRAYPCLTPKHEESRSLECPLLRYSKLKSMSQIDLELPQNKEGEKEVNQNNTLREEDKGASLPLLTQAEDSNIESPKTPLPWSNRFFGIPPADSPNSSPRWSSGLSKKSSLGKTEFASDSNEVNGVDEADDVNNLKRQVHLDRKSLMALYMELDEERSASAVAANNAMAMITRLQEEKAALQMDALQYQRMMEEQIEYDEEALQEYNDMILKLEEETKNLETELGIYREKYGCLTEDDFNEAHSSHGGNEDNEEKDLSLHQAVSSKAENGGGKLNESLKDFRMEKTYVLGRMKKSESRTLLAESGI* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2200 492 Coils Coil 350 377 - -
Lja4g2200 492 PANTHER MYOSIN-BINDING PROTEIN 6-RELATED 1 485 - -
Lja4g2200 492 MobiDBLite consensus disorder prediction 224 239 - -
Lja4g2200 492 PANTHER MYOSIN-BINDING PROTEIN 2 1 485 IPR039306 GO:0017022
Lja4g2200 492 Coils Coil 382 416 - -
Lja4g2200 492 Pfam Zein-binding 320 410 IPR007656 -
Lja4g2200 492 MobiDBLite consensus disorder prediction 424 444 - -
Lja4g2200 492 MobiDBLite consensus disorder prediction 251 265 - -
Lja4g2200 492 MobiDBLite consensus disorder prediction 221 305 - -
Lja4g2200 492 ProSiteProfiles GTD-binding domain profile. 316 414 IPR007656 -
Lja4g2200 492 MobiDBLite consensus disorder prediction 281 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2200 Lja-Chr4 23729625 23731388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2200 - - lja:Lj4g3v1598220.1 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2200 4 23729625 23731388 Lja4g2200 4 23729625 23731388 ECH