Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2198 ATGGCACACCGCTCCTCTCAACGGCGGAACTTGGCACCACCAGAACCCAATCCGCCGCCTGCTCCGGCGAACCACCCAAAACCCACCATCTTCTCAGCCTCACCTTCACACCACCACTACCCAAAACCAAACCCAGATCTCATCCATGCCTCTAAATCCTCTTTCTTAGTAAAACCCTTCTCCAGCTTAAACTTGAGTCGCAATCACCGCAAACAATCGCAAACCAAACACTCTTCTTCTTCTCTCGTCGACACCCTTTCTCAGACCAAGTCCATGACCTCCTCCGCCATAGTTGAATCCTCCAAATACTCACTCCCCAAACCGAACACTACCCACAACACAGTTCTCGCACAGAAGGACCATGTGAAGAAGACCCACAAGGAGAAACCGAGTTTGATGAAGAATGAGAAGAAGGATTCAATTGACAGGTGTGTTCTGGTTGAGGATGTTAAGAAGAAGATTGAGAAATCGAAACATGATGTTGTGGAGAGAGTTTCGGTTTCTCTGGGTAAGAGTGGGGGAAGGAGAAGATCGTTCTGTGGGTCGCAGGTTGATTTGGGTGATGTGTTTGCAATCAATGGGGCGAAAATGGTTTCAGCTGATATGCCACCGTTTATGCAGATCCATGCTGTGGATTGTGCCAGAAAAGCTATTGATAGTATGGAGAAGTTCACATCCAAGACCCTTGCATTATCACTCAAGAAGGAATTTGATGGGGTGTATGGGCCAGCATGGCACTGTATTGTGGGGACAAGTTTTGGGTCTTTTGTGACCCATTCCGTTGGAGGGTTTCTATATTTCTCCATGGATCAAAAGTTATACATCCTCTTATTCAAGACCACTGTACAAAAAGCAGATTGA 861 0.4681 MAHRSSQRRNLAPPEPNPPPAPANHPKPTIFSASPSHHHYPKPNPDLIHASKSSFLVKPFSSLNLSRNHRKQSQTKHSSSSLVDTLSQTKSMTSSAIVESSKYSLPKPNTTHNTVLAQKDHVKKTHKEKPSLMKNEKKDSIDRCVLVEDVKKKIEKSKHDVVERVSVSLGKSGGRRRSFCGSQVDLGDVFAINGAKMVSADMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTTVQKAD* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2198 286 PANTHER INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE 1 286 - -
Lja4g2198 286 Pfam Dynein light chain type 1 196 280 IPR001372 GO:0007017|GO:0030286
Lja4g2198 286 MobiDBLite consensus disorder prediction 1 47 - -
Lja4g2198 286 SMART Dynein_light_2 190 280 IPR001372 GO:0007017|GO:0030286
Lja4g2198 286 MobiDBLite consensus disorder prediction 66 90 - -
Lja4g2198 286 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 191 281 IPR037177 GO:0007017|GO:0030286
Lja4g2198 286 MobiDBLite consensus disorder prediction 12 26 - -
Lja4g2198 286 PANTHER DYNEIN LIGHT CHAIN 1 286 IPR001372 GO:0007017|GO:0030286
Lja4g2198 286 SUPERFAMILY DLC 193 280 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2198 Lja-Chr4 23687705 23689629 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2198 - - gmx:100806149 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2198 4 23687705 23689629 Lja4g2198 4 23687705 23689629 ECH