Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2192 ATGAAGACGACGAAGGGTGGCAAGGTCATGAACCCTACCGATGCTTACCGGAAGGAGCTTCGGAAGAAGGAATTGAAAAGGAACAAGAAGGAAAGAAAGAAGGTGAGGGAAGTGGGGATTTTGAAGAAAGACCCTGAGCAACTCAAGAAGCAGATTGACAACTTGGAAATGATGAAGGCTGATGGTGCCTTGGATAAAGCAAGAAAGCACAAGAAGAGACAACTACAAGATACACTTAATCTTGTCGTAAAGAAGAGGAGGGAATATGAAGATAAAATGAAGGAGAAGGGGGAGACCCCTGTTATGTTCAGCCATTTGGGGCCTCCTCGAAGGAGAACAACTGCTGAAGAAGAAGAGAGAGTTAATCACCCAAAGCCTGAGGACTCCGTTTATTACCATCCTACATTAAATCCTACTGGGGCTCCACCACCAGGGAAACCTCCTATGTTTGTATCGTCTATAGGTCCCAGAATTCCCTTGTCTGGTGCTTCGTCAAGTGCTGCTGCATCATCATCGGCAACAGAGTCCGAAAATGATGTGTTAGCTGTACCTCCACCCCCCCCACCACCACCACTGCCTGATTCTGGCACTGCAAGTTCTGCAGATGGTGCTGTTTTACCTGCTTCTTTGCCATTGCCTCCTCCACCTCCAATGCCGCCAAAGCCTGCTACTGCTGTGCCTACATCATTACCTCCACCTCCTTTGCCTCCTCCACCTCCTGGTCCTCCACCTAAAGATCAAATTGCAAGTCGGCCTATACCCCCTCCACCTCCACCCCTACAACAGTCTCAGCCACCTCCACCTGGCACTGGTGTAGGTATGGAGAGAAATCAGTCTGCATTGACAGATGATTTACCTTTCAAGGCGCCTGGTCAGGTGCAGCTGCCTCCTCCCCCTCCTCCACCCAAGTCTGGTGTTATTCAGTCTGATGGTGCTGCAGCTTCTACTGACAATAAGAATACCCTTTCTAGCCAGGAGATCCCTAAAATGGTTCCTGGGCTTCCTCCTCCTCCTCCAAGGCAACAACCTTCTGTTCCAGGTCCCCCATTAATCCCAAGTTTACAGGCTGATGTATTGCCCCCTGGAATATCCCGATTTTTGCCACCACCACCACCACCACCAACACCTGATATGAGGTCTCCTTTACCTGTTGCGGGACTCCCTGGTCAGGCACTGCCTCCTGGAATGATGGTCCCTCTAATTCATAGGCCACCATATGGTCCTCCACCTGGGCCTCCTCCAATGATGAAACCACCACTTCCACCTGGTCCTCCTCCAAACTTCCACGAAGAGGATCATTTGGCATTAAGGCAACTTCCTCCTCAGAAGCCATCTTATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCTCAGCACACTCCAGAACTTACAGCTATGATTCCTGCATCTGTTCGAGTGAGGAGAGAGGCTGCAATGATTAAAACAAAACCAAAACCTTCACTGCCAACAACCTCTAGGACCGTTTCTGGGAAATCAGGGCCGACTAATGTAAAACCAGAGTCAGTGAGCTCATCATCAGCTCCAAAAGCACCGAGCATCGATGACTCATATTCAGCTTTCTTAGAGGACATGAAAGCCCTTGGTGCGCTTGATGGTTGA 1629 0.4936 MKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPEQLKKQIDNLEMMKADGALDKARKHKKRQLQDTLNLVVKKRREYEDKMKEKGETPVMFSHLGPPRRRTTAEEEERVNHPKPEDSVYYHPTLNPTGAPPPGKPPMFVSSIGPRIPLSGASSSAAASSSATESENDVLAVPPPPPPPPLPDSGTASSADGAVLPASLPLPPPPPMPPKPATAVPTSLPPPPLPPPPPGPPPKDQIASRPIPPPPPPLQQSQPPPPGTGVGMERNQSALTDDLPFKAPGQVQLPPPPPPPKSGVIQSDGAAASTDNKNTLSSQEIPKMVPGLPPPPPRQQPSVPGPPLIPSLQADVLPPGISRFLPPPPPPPTPDMRSPLPVAGLPGQALPPGMMVPLIHRPPYGPPPGPPPMMKPPLPPGPPPNFHEEDHLALRQLPPQKPSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIKTKPKPSLPTTSRTVSGKSGPTNVKPESVSSSSAPKAPSIDDSYSAFLEDMKALGALDG* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2192 542 Coils Coil 13 33 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 110 127 - -
Lja4g2192 542 PANTHER WW DOMAIN-BINDING PROTEIN 11 250 541 - -
Lja4g2192 542 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 316 - -
Lja4g2192 542 Pfam mRNA biogenesis factor 126 186 - -
Lja4g2192 542 Coils Coil 72 92 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 158 178 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 291 305 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 89 431 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 1 33 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 309 327 - -
Lja4g2192 542 Pfam WW domain binding protein 11 7 84 IPR019007 GO:0006396
Lja4g2192 542 MobiDBLite consensus disorder prediction 330 355 - -
Lja4g2192 542 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 316 IPR019007 GO:0006396
Lja4g2192 542 MobiDBLite consensus disorder prediction 479 524 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 208 266 - -
Lja4g2192 542 PANTHER WW DOMAIN-BINDING PROTEIN 11 250 541 IPR019007 GO:0006396
Lja4g2192 542 MobiDBLite consensus disorder prediction 398 428 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 488 522 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 181 195 - -
Lja4g2192 542 MobiDBLite consensus disorder prediction 363 381 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2192 - - gsj:114393646 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2192 4 23627643 23633381 Lja4g2192 4 23627643 23633381 ECH