Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2183 ATGGAGAAAAATGAGCAGAAAAGTGTGGAAGACAATGAGAAAGGTGTAGTGAATAATGATTCAAAGATTAACTACAGAGGATGGAAGGTCATGCCCTTCATCATTGGAAATGAAACTTTTGAGAAGCTGGGAACAATTGGCACCTTGGCCAACCTCTTAGTCTATCTAACAACTGTGTTCAACATGAGTAGTATTACAGCTACAAATATCATCAACGTCTTTAATGGCAGTGCAAATCTAGCTACCTTACCAGGAGCTTTTCTTACTGACACTTATTTTGGTCGCTATAAGACACTGGGATTCTGCACATTTGCTTCCTTTCTGGGGTTGCTTATTATACAACTAACAGCATTGATTAAGAGCATGCATCCACCACACTGTGAAAACGAGAGCACCACTTGCATAGGGCCAAGCACAGGGCAAATGGCATTTCTACTGATAGGATTTGGATTTCTGATAGTAGGAGCTGCAGGGATCAGACCTTGTAATTTGGCATTTGGAGCTGATCAGTTCAACCCCAACACTGAGTCTGGGAAGAAGGGAATCAATAGCTTCTTCAATTGGTACTTCTTCACCTTCACTTTTGCTCAGATGGTGTCATTATCACTAATAGTTTACATACAAGCAGATGTAAGTTGGGCACTTGGGTTAGGAATTCCAGCTGCTTTGATGCTGTTTTCATGCATAGTTTATTTCCTGGGAAGCAGATACTATGTGAAAATTAAAGCAACAGGTAGTCCAGTCACAAGTATGGTTCAAGTTGTGGTTGTGGCTGTGAAGAAAAGGAGCCTGAATCTACCAGAGTTTCCATTGGATTCTTCACTCTTTACCTATATGTCTTCCCAGTCTATTAACTCCAAGCTTCCTCACACTTCTCAATTCAGGTTCCTGGACAAAGCTGCAATTATAACCTCAAAAGATCAGATAAACCCTGATGGCTCTGCATCTGATCCATGGAAACTTTGCAGCATGCAGCAAGTGGAAGAGATGAAATGCTTGCTGAGAGTGATCCCTATTTGGATTTCAGGCATGCTCTACTATATTGCCATTATCCAGCAGAGCACCATGCTAGTCTTCCAAGCCCTTCAATCCGACAGGCGAGTCTTCAACACCAATTTCAAGATCCCAGCAGCTTCCTACACCATCTTCACCATGCTGAGCCTGAGCATATGGCTCCCTATATATGATCGAATCATCGTGCCCTCGCTCCGGAAGCTCACCGGAAAAGAAGGCGGCATCACACTTCTTCAAAGGATGGGAATTGGCATGTTCCTATCTGTGCTCTGCATGCTAGTTTCTAGTGTGGTGGAAAATCAAAGAAGGACCATGGCTCTGACTAAGCCTGTAGTAGGATGGGAACCAAGAAAAGGTGCCATTTCTTCAATGTCAGGGTTGTGGTTGGTTCCTCAACTAGCATTAGCAGGACTATCTGATGCATTTACATTGGTGGGGCAAGTTGAGTTTTTCTACAAACAGTTTCCTGAAAACATGAGAAGCCTTGCAGGGTCTCTTTTCTTCTGTGGCTTGGCAGGGTCAAGTTATTTGAGTAGTTTGCTGATTTCCATTATCCATAGGGTGACTGAAAAATCTGCATCAGGGAATTGGTTGCCTCAGGATCTCAACAAGGGGAGATTGGATTACTTTTATTACATAATTACTGGTTTACAAGTAGTTAATTTTGGTTACTTTATTTTGTGTGCTAAGTGGTATAAGTACAAAGGGGTTGGAAGTGCTAGTTAG 1740 0.4241 MEKNEQKSVEDNEKGVVNNDSKINYRGWKVMPFIIGNETFEKLGTIGTLANLLVYLTTVFNMSSITATNIINVFNGSANLATLPGAFLTDTYFGRYKTLGFCTFASFLGLLIIQLTALIKSMHPPHCENESTTCIGPSTGQMAFLLIGFGFLIVGAAGIRPCNLAFGADQFNPNTESGKKGINSFFNWYFFTFTFAQMVSLSLIVYIQADVSWALGLGIPAALMLFSCIVYFLGSRYYVKIKATGSPVTSMVQVVVVAVKKRSLNLPEFPLDSSLFTYMSSQSINSKLPHTSQFRFLDKAAIITSKDQINPDGSASDPWKLCSMQQVEEMKCLLRVIPIWISGMLYYIAIIQQSTMLVFQALQSDRRVFNTNFKIPAASYTIFTMLSLSIWLPIYDRIIVPSLRKLTGKEGGITLLQRMGIGMFLSVLCMLVSSVVENQRRTMALTKPVVGWEPRKGAISSMSGLWLVPQLALAGLSDAFTLVGQVEFFYKQFPENMRSLAGSLFFCGLAGSSYLSSLLISIIHRVTEKSASGNWLPQDLNKGRLDYFYYIITGLQVVNFGYFILCAKWYKYKGVGSAS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2183 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 576 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja4g2183 579 SUPERFAMILY MFS general substrate transporter 27 571 IPR036259 -
Lja4g2183 579 Pfam POT family 102 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja4g2183 579 Gene3D MFS general substrate transporter like domains 1 576 IPR036259 -
Lja4g2183 579 PANTHER PEPTIDE/NITRATE TRANSPORTER 14 576 - -
Lja4g2183 579 CDD MFS_NPF1_2 31 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2183 Lja-Chr4 23486699 23490605 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2183 8 575 Organic Solute Cotransporters AT1G18880 59.474 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2183 - - gmx:100101839 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2183 4 23486699 23490605 Lja4g2183 4 23486699 23490605 ECH