Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2177 ATGTTCATGCAATTACCAAACGAAGAAGGACAGGTGCAAGTTTGGGAAGGCTATGTAGATTGGAGGAACAGACCAGCCAAAAAAGGACATCATGGTGGCATGCTTGCTGCTTCCTTTGTTTTGGCTGTGGAGGTATTAGAGAACCTAGCATATCTTGCTAATGCAAGCAACCTTGTTTTGTACCTGACCAAGTTTATGCACTTTTCACCATCCACCTCTTCCAACATTGTCACCAATTTCATGGGAACAGCTTTCCTCCTTGCTATTCTTGGTGGGTTTCTGGCTGATGCATTTTTCACCACTTATTCCATCTATCTCATAAGTGCTGCAATAGAATTCATGGGCCTATTAGTCCTTACAATACAAGCACACATGCCATCACTGAAACCACCAAACTGCCTTATGGGAGATTCCAGCAGTCACCTATGTCAGAAACTTCATCAAGGGGAGGCAGTTATGCTCTTTGCAGGCCTCTATCTAGCAGCTCTCGGCGTAGGAGGAATAAAAGGATCACTTCCTCCTCATGGGGCTGAGCAGTTAGATGAGACCACCCTAGATGGAAGGAAAAAGAGGTCTGAATTTTTCAATTACTTTGTCTTCAGCCTCTCATGTGGGGCATTGATTGCAGTCACTTTTGTGGTGTGGATTGAAGACAACAAGGGATGGCAGTGGGGTTTAAGTGTCTCAACTGCATCAATATTGATCTCCATTCCAGTTTTCCTTCTTGGTTCACCAACATACAGGACCAAGATTCCATCTGGAAGCCCCATCACATCCATGTTCAAGGTTGTTGTTTCTGCAGTTTGCAACAACTTCAAATCAGGGAATTCAACCAATGCTGTCATAAACATGGCCACAAGTCCATCCCACACAACTGAAATCGGTGGTGAAGTTGAAGAAAGTAACACTACAAAAGAGGATCAGCTAAGTCAAAGGACTCAAACCCCAACAGAAAGCCTTAAATTCCTTAATAAAGCAGTGATGGAACCAGTTCATCCTATGCTGCAGTGCACAGTAAAGGAAGTTGAAGAGGCCAAGGTAGTATTAAAGATCCTTCCCATATTCATGTCCACCATAATGCTTAACTGTTGCCTTGCTCAGCTATCAACCTTCTCAGTCCAACAATCAGCCACAATGGACACCATGCTTGGTTCCTTCAAGGTCCCACCAGCTTCTCTACCTGTGTTCCCTGTTCTCTTCATCATGATCCTTGCCCCACTCTACAACCATTCCATTGTCCCATTTGCAAGGAAAGTGACCAAAACTGAGATGGGCATAACACATCTACAGAGAATAGGGACAGGGCTATTTCTCTCTATTGTGGCAATGGCAGTGGCTGCTTTGGTGGAAACCAAGAGAAAGAAAACAGCTGCTGAATTTGGTTTATTAGATTCTACCAAGCCTCTTCCCATGACATTCTTGTGGGTGGCTTTTCAATACTTGTTTCTTGGTTCTGCTGATCTTTTCACTTTGGCTGGGATGATGGAGTTCTTCTTCACAGAGGCACCATGGAGCATGAGGTCATTGGCCACAGCACTCTCATGGGCCTCACTGTCCATGGGGTACTTCCTGAGCACTGTTCTTGTGTCCATTATTAATAAGGTCACAGGAGCTTTTGGACACACACCATGGCTCTTGGGTAGCAACTTGAATCATTATCATCTTGAGAGATTTTATTGGTTGATGTGTGTGCTTAGTGGACTAAATTTTATTCATTATCTCTTCTGGGCCAATTCCTACAAGTACAGAGGTTCACCAAGGTCTGGATATTAG 1773 0.4405 MFMQLPNEEGQVQVWEGYVDWRNRPAKKGHHGGMLAASFVLAVEVLENLAYLANASNLVLYLTKFMHFSPSTSSNIVTNFMGTAFLLAILGGFLADAFFTTYSIYLISAAIEFMGLLVLTIQAHMPSLKPPNCLMGDSSSHLCQKLHQGEAVMLFAGLYLAALGVGGIKGSLPPHGAEQLDETTLDGRKKRSEFFNYFVFSLSCGALIAVTFVVWIEDNKGWQWGLSVSTASILISIPVFLLGSPTYRTKIPSGSPITSMFKVVVSAVCNNFKSGNSTNAVINMATSPSHTTEIGGEVEESNTTKEDQLSQRTQTPTESLKFLNKAVMEPVHPMLQCTVKEVEEAKVVLKILPIFMSTIMLNCCLAQLSTFSVQQSATMDTMLGSFKVPPASLPVFPVLFIMILAPLYNHSIVPFARKVTKTEMGITHLQRIGTGLFLSIVAMAVAALVETKRKKTAAEFGLLDSTKPLPMTFLWVAFQYLFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWASLSMGYFLSTVLVSIINKVTGAFGHTPWLLGSNLNHYHLERFYWLMCVLSGLNFIHYLFWANSYKYRGSPRSGY* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2177 590 Gene3D MFS general substrate transporter like domains 5 587 IPR036259 -
Lja4g2177 590 CDD MFS_NPF4 34 577 - -
Lja4g2177 590 PANTHER PROTEIN NRT1/ PTR FAMILY 4.7 17 585 - -
Lja4g2177 590 Pfam POT family 106 545 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja4g2177 590 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 585 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja4g2177 590 MobiDBLite consensus disorder prediction 290 314 - -
Lja4g2177 590 SUPERFAMILY MFS general substrate transporter 49 578 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2177 Lja-Chr4 23427237 23432408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2177 9 585 Organic Solute Cotransporters AT1G69850 65.925 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2177 - K14638 gmx:100796577 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2177 4 23427237 23432408 Lja4g2177 4 23427237 23432408 ECH