Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2174 ATGACCACCAAAACGACGCCGTTTCACCACCAGCCACCGCAAACCGTCAGGAGGCTGGTGGTGGAGGTGGTGGACGCGCGGAACCTGCTTCCCAAAGATGGCCAGGGAAGCTCCAGCCCTTATGTAGTGGCGGACTTCGACGGCCAGAGGAAGCGAACCACCACCCGGTTCAAGGAGCTCAACCCGGTATGGAACGAACCGCTCGAGTTCATCGTCTCCGACCCGGAGACCATGGAGTTTGAGGAGCTGGAGGTTGAGGTCTATAACGATAAGAAGTTTGGGAACGGTAGCGGCCGGAAGAATCACTTCCTCGGAAGGGTCAAGCTCTATGGAACCCAGTTTTCTCAGAGAGGGGAAGAAGCTCTGGTTTACTATACTCTAGAGAAGAGGAGCGTGTTCAGTTGGATCAGAGGTGAGATTGGACTCAAGATTTATTACTACGATGAGCTGTTGCTTCATGATGATGAGAAACAGCAGCAGCAGCAACCGCCGCCGGAGCAAGAGAGGAGCAGGATGGTGGTAGAAGAAGGAAGGGTGTTTGAAGTTCCTGGACAAATGGAGCATTGCGTGCCTCTTCCTGAAGGTCCACCTCATTCGCCGCGTGTTGTGGTGGTGGAGCAATCGCCGCCGCCGGTGGTTCATGTCCAGCAGGATCAACCGGAGGTGCAGGAAATGTATGGTCCTCCGGTGCAGGAAATGCCGTACCATCATCATCCTGAGGTGAGGAAAATGCAGGCGGTTAGAGGGGAGAGGGTGAGGGTTCTGAAGAGGCCTAACGGTGGTGGTGACTACTCGCCGAAGAACATCTCCGTCAAGAAGGAGAAGGCTGGTGTTGATACCGAGAGGGTGCATCCCTTCGATCTGGTGGAACCGATGCAGTATCTGTTTGTGAGAATCGTGAAGGCTCGCGGTGTTGCTCCGCCCGGTGAAAGCCCCTACGTCAAGGTGAGAACGTCCAGCCACTACGTCAGATCGAAACCAGCGAGTCTCCGGCCAAACGAGCCCAGCGACTCGCCGGAGTGGAACCAGGTGTTTGCATTGGGTTACAACAAGAACGACGCCAACAGCGCTACGCTGGAGATCTCAGTTTGGGATTCCCCGACGGAGAGTTTCCTCGGCGGCGTTTGCTTCGATCTCTCCGACGTCCCGGTGCGAGATCCTCCAGACAGCCCCCTGGCTCCGCAGTGGTACCGTCTAGAAGGAGGCGCCGCCGATCAAAACCCTGGCAGAGTCTCCGGTGACATCCAGCTCTCCGTCTGGATCGGTACCCAATCCGACGACGCATTCCCGGAAGCGTGGAGCTCCGACGCGCCGTATGTAGCGCACACTCGCTCCAAGGTTTACCAATCGCCGAAGCTCTGGTATCTCCGGGTGACGGTTATCGAAGCGCAGGATCTAAACATGGCTCAGAATCTCCCTCCATTGACAGCACCGGAAGTTAGAGTGAAAATCCAATTAGGGTTCCAATCGCAGAGAACAAGGCGAGGCTCCATGAACCACCACAGCATGTCGTTTCACTGGAACGAGGAGCTTCTCTTCGTCGCCGTAGAACCGCTAGAAGAAACGGTTATCCTCCTTGTAGAAGATCGAACCACCAAGGAACCTTCGCTGTTAGGCCACGCCGTGATTCCTTTAGTCTCAATCGAGCAACGGATCGACGAGCGTCACGTGCCGGCGAAATGGTTCACTCTAGAAGGAGGTTCCTACTGCGGCAGAGTCCACCTCCGCCTCTGCTTAGAAGGAGGCTATCACGTGCTCGACGAGGCGGCGCACGTGTGCAGCGACTTCCGTCCCACGGCGAAGCAGTTATGGAAACCACCCGTCGGAATTCTGGAGCTCGGAATCCTCGGCGCTCGCGGCCTTCTTCCGATGAAATCCAAGGGCCCTGGAAAAGGGTCCACCGATGCTTACTGTGTTGCCAAGTACGGGAAGAAGTGGGTCCGAACGCGCACCGTCACCGACAGCTTCGACCCACGGTGGAACGAGCAGTACACGTGGCAGGTTTACGACCCCTGCACCGTCCTCACCGTCGGGGTTTTTGATAACTGGCGCATGTTCGCTGAAGTCTCAGAGGAAAAACCAGATAGCCGCATCGGAAAGGTACGAATTCGTGTTTCCACGCTTGAGAGCAACAAAATCTACACCAGTTCGTATCCTCTTCTGGTTCTGACACGAACCGGGTTGAAGAAGATGGGGGAGATTGAGCTAGCGGTGCGGTTTGCGTGCCCGTCGTTGCTGCCGGAAACTTCTGCGGTTTACGGGCAGCCGCTGCTGCCCAGAATGCACTACCTCCGCCCGCTTGGGGTGGCACAGCAGGAGGCTCTTCGCGGCGCAGCCACGAAGATGGTGGCGCAATGGCTGGCGAGGTCGGAGCCGGCGTTGGGGCATGAGGTGGTTCGGTACATGCTGGATGCGGATTCACACGCTTGGAGTATGAGGAAGAGCAAGGCGAATTGGTTCAGAATTGTGGCGGTTTTGGCCTGGGCTGTTGGGTTGGCGAAGTGGTTGGATGACATAAGGAGGTGGAGGAATCCGGTGACGACGGTGCTGCTTCATGTTCTCTACTTAGTGCTAGTTTGGTACCCGGATTTGATTGTTCCCACAGGGTTTCTATACATTGTTCTGATTGGGATATGGTACTACCGGTTCCGGCCGAAGATTCCGGCGGGGATGGATACACGGTTGTCGCAGGCGGAGGCGGTTGACCCGGATGAGCTTGATGAGGAGTTTGACACAATGCCGAGTTCCAAGCCGCCCGAGCTGATTCGCGTCCGGTACGATAGGTTGAGGATGTTGGCCGCCAGGGTTCAGACGGTGTTGGGTGATTTCGCGACGCAGGGGGAGAGGGTTCAGGCATTGGTGAGCTGGAGGGACCCGAGGGCTACTAAATTGTTCATTGGGGTGTGTCTATTGATTACCATTGTGCTCTACTCGGTGCCGCCGAAGACGGTGGCGGTGGCATTGGGGTTTTACTACCTCCGGCACCCCATGTTCCGGAACCCAATGCCGCCGCGGAGTTTGAACTTTTTCCGGCGACTGCCTAGCTTGTCTGATCGGTTAATGTAG 3066 0.5649 MTTKTTPFHHQPPQTVRRLVVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNEPLEFIVSDPETMEFEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSQRGEEALVYYTLEKRSVFSWIRGEIGLKIYYYDELLLHDDEKQQQQQPPPEQERSRMVVEEGRVFEVPGQMEHCVPLPEGPPHSPRVVVVEQSPPPVVHVQQDQPEVQEMYGPPVQEMPYHHHPEVRKMQAVRGERVRVLKRPNGGGDYSPKNISVKKEKAGVDTERVHPFDLVEPMQYLFVRIVKARGVAPPGESPYVKVRTSSHYVRSKPASLRPNEPSDSPEWNQVFALGYNKNDANSATLEISVWDSPTESFLGGVCFDLSDVPVRDPPDSPLAPQWYRLEGGAADQNPGRVSGDIQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTVIEAQDLNMAQNLPPLTAPEVRVKIQLGFQSQRTRRGSMNHHSMSFHWNEELLFVAVEPLEETVILLVEDRTTKEPSLLGHAVIPLVSIEQRIDERHVPAKWFTLEGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPPVGILELGILGARGLLPMKSKGPGKGSTDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFAEVSEEKPDSRIGKVRIRVSTLESNKIYTSSYPLLVLTRTGLKKMGEIELAVRFACPSLLPETSAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPALGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWRNPVTTVLLHVLYLVLVWYPDLIVPTGFLYIVLIGIWYYRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPELIRVRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLLITIVLYSVPPKTVAVALGFYYLRHPMFRNPMPPRSLNFFRRLPSLSDRLM* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2174 1021 Gene3D C2 domain 592 741 IPR035892 -
Lja4g2174 1021 Gene3D C2 domain 440 579 IPR035892 -
Lja4g2174 1021 CDD C2C_MCTP_PRT_plant 455 598 - -
Lja4g2174 1021 CDD C2B_MCTP_PRT_plant 294 423 - -
Lja4g2174 1021 ProSiteProfiles C2 domain profile. 272 397 IPR000008 -
Lja4g2174 1021 PANTHER BNAA10G16860D PROTEIN 14 1021 - -
Lja4g2174 1021 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 14 1021 - -
Lja4g2174 1021 Gene3D C2 domain 290 437 IPR035892 -
Lja4g2174 1021 Gene3D C2 domain 14 179 IPR035892 -
Lja4g2174 1021 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Lja4g2174 1021 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 165 IPR035892 -
Lja4g2174 1021 Pfam C2 domain 294 397 IPR000008 -
Lja4g2174 1021 Pfam C2 domain 454 564 IPR000008 -
Lja4g2174 1021 Pfam C2 domain 609 720 IPR000008 -
Lja4g2174 1021 Pfam C2 domain 18 113 IPR000008 -
Lja4g2174 1021 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 294 439 IPR035892 -
Lja4g2174 1021 SMART C2_3c 294 391 IPR000008 -
Lja4g2174 1021 SMART C2_3c 18 123 IPR000008 -
Lja4g2174 1021 SMART C2_3c 455 557 IPR000008 -
Lja4g2174 1021 SMART C2_3c 610 717 IPR000008 -
Lja4g2174 1021 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 609 761 IPR035892 -
Lja4g2174 1021 ProSiteProfiles C2 domain profile. 434 562 IPR000008 -
Lja4g2174 1021 ProSiteProfiles C2 domain profile. 592 718 IPR000008 -
Lja4g2174 1021 CDD C2D_MCTP_PRT_plant 610 737 - -
Lja4g2174 1021 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 454 600 IPR035892 -
Lja4g2174 1021 Pfam Plant phosphoribosyltransferase C-terminal 866 1021 IPR013583 -
Lja4g2174 1021 CDD C2A_MCTP_PRT_plant 18 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2174 Lja-Chr4 23416246 23419893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2174 4 1021 Lipid Metabolism Gene Families AT1G74720 71.205 0.0 1546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2174 - - gmx:100783882 1742.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2174 4 23416246 23419893 Lja4g2174 4 23416246 23419893 ECH