Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2173 ATGGCTAATGCAAGAGGTGCTACTCCAAGGGTTGGAGTAACAACAAGGGCACGGGCACGGGCACGGGCACAAACTCCAGTTGTTGAAGAGATTGTACCTAATTCTGGATGGACAGAGGACTCTGCAGGGCATTATCTTCTAGTTGATCTTCCCGAATTCAGGAAGGAGGAGGTGAAGCTTCAGGTTGATAGCTATGGCCGTATCGTTGTAAAGGGAGAAAGGCAAGCAAATGAGCAGAAACGTGTTCATTTTCAGCTGGTTTTTCCAGTGCCGGTGGATTCCGATACGGATAAGCTAGCCGGACATTTTGACGGTGGAATCCTTTATGTGACTGTCCCCAAGCGAGTAGCAGAAGAGAAGAACCAAGAAAGTGAAGCTGAGAAAGCTGGGAATGGTGATGTAGCTGAAGCTGAAAGAGCACAAGAACATGATAGCCATGAACCTGTTGTTGATCATGAGAGGAGGGATCCTATGCCACAACATGAAAACCATACTGAGCAGGAGGAAGAAAGAAGAAGAAATGAAAATCCGCAGATCCAAGAACTTTCTGAACAAGTCATAAGGAAGTGGAATCAAGAATCCATGCTCAGAAGTGCAAGGGTGGTTCTGATAAAAAACAAAGGAATTGTTATAACGGCTGTCATAGCCTTTTCCTTGGGTCTGTTCATATCTCGTAAATTTGATTTCTCAGCAGAACCCTAA 702 0.4516 MANARGATPRVGVTTRARARARAQTPVVEEIVPNSGWTEDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQANEQKRVHFQLVFPVPVDSDTDKLAGHFDGGILYVTVPKRVAEEKNQESEAEKAGNGDVAEAERAQEHDSHEPVVDHERRDPMPQHENHTEQEEERRRNENPQIQELSEQVIRKWNQESMLRSARVVLIKNKGIVITAVIAFSLGLFISRKFDFSAEP* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2173 233 CDD ACD_sHsps-like 37 114 - -
Lja4g2173 233 SUPERFAMILY HSP20-like chaperones 29 119 IPR008978 -
Lja4g2173 233 Gene3D - 10 125 IPR008978 -
Lja4g2173 233 MobiDBLite consensus disorder prediction 119 180 - -
Lja4g2173 233 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 18 232 - -
Lja4g2173 233 Pfam Hsp20/alpha crystallin family 38 123 IPR002068 -
Lja4g2173 233 MobiDBLite consensus disorder prediction 119 178 - -
Lja4g2173 233 PANTHER HEAT SHOCK PROTEIN 26 18 232 IPR045045 -
Lja4g2173 233 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 26 129 IPR002068 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2173 - - cam:101491080 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2173 4 23412396 23413772 Lja4g2173 4 23412396 23413772 ECH