Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2171 ATGGATCATCAATGGCGTCCCAATCCCAGACCAATTCAATTCCAACCCAATGTGTGTCCTACCTGCTCAATCTCACACTTCCCCTTTTGCCCTCCCCCACCGTTCACCTCTCACCCTTGCTGGCCGCCGCACCACCCCAATTATCACCTCGCCGACGCCGATAGAAACTTCAAGCGACCCAGAATCATCGACGAACCTTTCTCCGAAGACGAGCGGAGATTGAAGCTGATTCGCGATCACGGTCTCAACCCTCCGCAACCTCCACACCACCACGGTTACGTTACACCACCCTTGCCGCACCACCACCACCAGCAACAACAACCTAATCAAAACGGGTTTCATTCCGATTCTCATCTTCACTACCCATTGCGTGGAATTCATCATCCTCATCAACAAGGACCTTATTACCATGAACACGCACAACCCCACGATTTTCGTCCCTCTATCAATGAATCACTGCATGCGCACGAGGCTAATTTTCCTCCAAATCAGAAGCTGAATGGGCACTATCACTATCCTTACCCTCCTGGAAGCAGTGGCAGTTTTTCTGAGAACATGGGTCAAATGGAAGGTTCAAGATTCTTCAGGGGCCAGCCTCCTCTTCCTTCTTCGCCACCGCCTCCACTTCCAATGGATCCACCCATGAAAGCATACTTTTCTCCACCCAAGCAGCCACCTTCTCTTTTTCCTGTTCATGAACCCTCAAAGCAGTACTTGGGAGATGCCCAATCTTTTTTGCGAAATCAGTTGACTGCTGAGAAGCCTAAGTTTGTTGATGCCTCCCACTTGTTTCGGCATCCGCATAGAGCTTCTCGTCCTGATCATTTTGTGATCATACTTCGAGGTCTTCCAGGTAGTGGTAAGAGTTACTTGGCAAAGATGTTGCGTGATCTTGAGATTGAAAATGGTGGTGATGCTCCACGTATTCATTCTATGGATGATTATTTTATGACTGAGGTGGAAAAGGTGGAGGATAATGATGCATCGAAGTCTTCAAGTTCAGGCAGAAACAAGAAGGCTGTAAAGAAAAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCATTCAAGAAAACAGTTGAGGAAGGAGATTTTACCTTTGTTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGGTATGAAGTTTACATTCTAGAAGCTACTTACAAGGACCCTGCGGGTTGTGCTGCGAGGAATGTCCATGGATTTACACAGGAAGACATAGAAAAGATGGCTGGGCAATGGGAAGACGCTCCATCATTGTATATGCAGCTTGATATGAAGTCATTATTTCATGGAGATGATCTAAAGCAAAGCAAGATACTGGAGGTTGACATGGATATGGAAGATGATCTTGGTGAGGCTTTACCTGCAGTGCAAGGAAGAGAAGCTGAGACAGTTGTTAACCCTCCAGTCAGGGATGATGCAGGTCCTGTAAAGGATGGAAAAAGATGGAGTGCTGAAGAGGAACATGTAATGGAAGTCAGAGAATTGGGTAAAAGCAAATGGTCAGAAGATTTTGCTGAAGATGACATTGTTCACACTGAAGGTATGAAGGGCAATATTAATGCTCTTTCTGGGTTAATTCATCAATATGGCAAGGAACAAAAATCTGTACATTGGGGTGACCAGGCTGGCAATACAGGGTTTTCAATTGGCTCTGCCAGGAAGGTAAATGCTTTGTCTTTAGTGATTGGACCTGGTGCTGGATACAACCTGAACACAAATCCATTACCACAAGAGGATAGTTCAACCCGTAATAGTGCAGAGCCAAAGAAGAACAACACATTTCAAGATCGAATCCGGGCTGAACGTGAATCTTTCAAAGCTGTTTTTGACAGGAGACGGCACCGGATTGGTGGTCTTAATGTGGAGGATGATTGA 1950 0.459 MDHQWRPNPRPIQFQPNVCPTCSISHFPFCPPPPFTSHPCWPPHHPNYHLADADRNFKRPRIIDEPFSEDERRLKLIRDHGLNPPQPPHHHGYVTPPLPHHHHQQQQPNQNGFHSDSHLHYPLRGIHHPHQQGPYYHEHAQPHDFRPSINESLHAHEANFPPNQKLNGHYHYPYPPGSSGSFSENMGQMEGSRFFRGQPPLPSSPPPPLPMDPPMKAYFSPPKQPPSLFPVHEPSKQYLGDAQSFLRNQLTAEKPKFVDASHLFRHPHRASRPDHFVIILRGLPGSGKSYLAKMLRDLEIENGGDAPRIHSMDDYFMTEVEKVEDNDASKSSSSGRNKKAVKKKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGDFTFVIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPAGCAARNVHGFTQEDIEKMAGQWEDAPSLYMQLDMKSLFHGDDLKQSKILEVDMDMEDDLGEALPAVQGREAETVVNPPVRDDAGPVKDGKRWSAEEEHVMEVRELGKSKWSEDFAEDDIVHTEGMKGNINALSGLIHQYGKEQKSVHWGDQAGNTGFSIGSARKVNALSLVIGPGAGYNLNTNPLPQEDSSTRNSAEPKKNNTFQDRIRAERESFKAVFDRRRHRIGGLNVEDD* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2171 649 MobiDBLite consensus disorder prediction 596 614 - -
Lja4g2171 649 MobiDBLite consensus disorder prediction 79 146 - -
Lja4g2171 649 MobiDBLite consensus disorder prediction 100 116 - -
Lja4g2171 649 MobiDBLite consensus disorder prediction 158 209 - -
Lja4g2171 649 Gene3D - 276 441 IPR027417 -
Lja4g2171 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 275 447 IPR027417 -
Lja4g2171 649 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 232 638 IPR026314 GO:0005634
Lja4g2171 649 MobiDBLite consensus disorder prediction 131 146 - -
Lja4g2171 649 MobiDBLite consensus disorder prediction 596 623 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2171 K17602 - gmx:100775851 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2171 4 23395283 23402226 Lja4g2171 4 23395283 23402226 ECH