Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2140 ATGAGTGGCGCTGGTAACGCCGCCGGCCGGAGTAGCAGCAGCACAACCGAAAGGAGGCGAAGAAGAAGGCCAACCTCGCCGCTGAAAGACCGTTCAGCAACGACTTCATCCAAGCTATCTTCTTCACCCAAACGAAGCACCTCACCATCCGCCACTCTCCTCGACGACGACCCAGTCGCTCTCTTCGACGACTATACCCACCCAAACCCTAACCCTCGAAGCTTCCCACACAGTGTCAAGCAGAAATGCTGGGAGAAAGCTGACAAGATCAAAGGACGAGACCCTGATCGATGGCGCAGGGACCCCCTCGGCAATACTATCTTTCGCAAGCTCGTAGGTTGCCCTGGTTGTCTCTGCCATGACTATGATCACATTGTTCCGTACTCCAAGGGGGGACAAAGCACACTGGAAAACTGTCAAGTATTACAGGCAACAGTTAATCGAGCAAAGGGTAACCGAACAGAGATCTCAAGAGCTGACCTGATGCAGAAGAGTTCTTATTGCAGGGTTTCAGGTCGTGATATGGATCTTCTGGAATTGTCAGCTTATGGCAATGTACGGCATGGACCAGATTCTGGGGGATGTAGAATTCAGTGA 597 0.5209 MSGAGNAAGRSSSSTTERRRRRRPTSPLKDRSATTSSKLSSSPKRSTSPSATLLDDDPVALFDDYTHPNPNPRSFPHSVKQKCWEKADKIKGRDPDRWRRDPLGNTIFRKLVGCPGCLCHDYDHIVPYSKGGQSTLENCQVLQATVNRAKGNRTEISRADLMQKSSYCRVSGRDMDLLELSAYGNVRHGPDSGGCRIQ* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2140 198 PANTHER HNH ENDONUCLEASE 14 198 - -
Lja4g2140 198 MobiDBLite consensus disorder prediction 29 53 - -
Lja4g2140 198 PANTHER HNH ENDONUCLEASE 14 198 - -
Lja4g2140 198 SMART HNH_5 102 148 IPR003615 -
Lja4g2140 198 Pfam HNH endonuclease 120 153 IPR002711 GO:0003676|GO:0004519
Lja4g2140 198 MobiDBLite consensus disorder prediction 1 80 - -
Lja4g2140 198 CDD HNHc 107 151 IPR003615 -
Lja4g2140 198 Gene3D - 78 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2140 Lja-Chr4 22962296 22964526 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2140 - - gmx:100500174 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2140 4 22962296 22964526 Lja4g2140 4 22962296 22964526 ECH