Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2126 ATGAACGGGTCAGCTCACAAGAGAACAACAACAGGTTTACCAACCACCACCGCCAGAGGTGGCCGCCGCGGCCGTCAGATCCAAAAAACCTTCAACAACGTCAAGATCACCATCCTCTGCGGCTTCGTCACCATTCTCGTCCTACGTGGCACCATCGGCGTCAACCTCAGCTCCTCCGACGCCGACGCCGTCAACCAGAACGTCATCGAAGAAACCAACCGCATCCTCGCCGAGATCCGATCCGACGCTGACCCTTCCGATCCCGACGACGCCGCCGCCGCCGAAACGTTCTTCAGCCCCAACGCCACCTTCACCCTCGGCCCCAAAATTACCGGTTGGGACCTTCAGCGCAAGGCGTGGCTCGATCAGAATCCTGAGTACCCAAATTTTGTTAGAGGTAAAGCTCGAATCTTACTCCTCACTGGGTCACCACCGAAGCCCTGTGATAATCCAATTGGTGACCATTACTTGTTGAAGTCCATTAAGAACAAGATTGATTACTGTAGATTACATGGGATTGAAATTGTGTATAATTTGGCTCATCTTGATGTTGAGCTTGCTGGGTATTGGGCTAAATTGCCTATGATTAGGAGGTTGATGCTGTCACACCCTGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTCACTGACATGGTGTTTGAGCTTCCTTTGTCTAAGTATGATGACTATAACTTGGTGCTTCATGGGTACCCTGATTTGTTGTTTGAGCAGAAGTCTTGGATTGCTGTCAATACTGGGAGCTTTCTTTTCAGGAATTGCCAGTGGTCTTTGGATTTGCTTGATGCTTGGGCTCCAATGGGTCCTAAAGGGCCGGTTCGTGAGGAGGCCGGGAAGGTCCTCACTGCGAATCTCAAGGGGAGGCCGGCTTTCGAGGCGGATGATCAGTCTGCATTGATATATCTGTTGCTGTCCAAGAAGGATAAGTGGATGGATAAGACGTTTCTTGAGAATTCGTTCTATTTGCACGGGTACTGGGCCGGGTTGGTCGATCGGTACGAGGAGATGATCGAGAAGTATCATCCGGGGCTAGGGGACGAGAGGTGGCCGTTTGTGACGCATTTTGTGGGGTGCAAGCCCTGTGGGAGCTACGGAGATTACCCTGTTGAGAAGTGCCTCAGTAGCATGGAGAGGGCTTTCAATTTTGCTGATAATCAGGTGCTCAAGCTCTACGGGTTCAGGCATCGCGGTCTGTTAAGCCCTAAGATCAAGAGAATCAGAAATGAGACAGTTACTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGGCATTCTTCAGAAAGCAGAGGATCAAAAAGCTAG 1332 0.503 MNGSAHKRTTTGLPTTTARGGRRGRQIQKTFNNVKITILCGFVTILVLRGTIGVNLSSSDADAVNQNVIEETNRILAEIRSDADPSDPDDAAAAETFFSPNATFTLGPKITGWDLQRKAWLDQNPEYPNFVRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPLSKYDDYNLVLHGYPDLLFEQKSWIAVNTGSFLFRNCQWSLDLLDAWAPMGPKGPVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKDKWMDKTFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVEKCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSSESRGSKS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2126 443 MobiDBLite consensus disorder prediction 1 24 - -
Lja4g2126 443 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 11 437 - -
Lja4g2126 443 Pfam galactosyl transferase GMA12/MNN10 family 134 372 IPR008630 GO:0016021|GO:0016757
Lja4g2126 443 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 134 281 IPR029044 -
Lja4g2126 443 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 11 437 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2126 Lja-Chr4 22793932 22796056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2126 13 435 Glycosyltransferase AT5G07720 80.140 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2126 K08238 - gmx:100793238 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2126 4 22793932 22796056 Lja4g2126 4 22793932 22796056 ECH