Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2114 ATGGATAAAGCTCTCACTAAACTGGGAAGCTCTTGGATCTCCAAGAAAGCCAAGGAAGAGATTTCCAACATATCATCTCTCTCAAATAGTGTTGAAGTGAAGGCAAAACTTTTCATCAACAAGCTTAAAGGCAAATCCCAAGTGAAACCCTTACCAGATCTCCTTCGAGAGCACAATCTTCCACCTGGTCTGTTCCCCCGAAACATAATATGCTATGAATTTGATGAAGCAAAAGGAAAATTGGTCGTGCACTTGTCCTCCCCTTGTGAGGTGTGCTTCAAGGACTCGTCCATAGTGAGATATGCAAATCGTGTCAAAGGGACACTGTCAAAGGGGAAGCTCACTCTTTCAGATGGAATGAAAACCAAGGTTCTGGTTTGGGTTAAGGTCACTAGTGTTGTTGTTGAGAGTTACAAGTCTGATAAAGTATGGTTCAATGCCTCTGGTGTGAAGAAATCAAGGCCCAAAGATGCTTATGAAATGCCTCGTGAAGCTATTAAGGTAGAACACTTTTGA 516 0.4225 MDKALTKLGSSWISKKAKEEISNISSLSNSVEVKAKLFINKLKGKSQVKPLPDLLREHNLPPGLFPRNIICYEFDEAKGKLVVHLSSPCEVCFKDSSIVRYANRVKGTLSKGKLTLSDGMKTKVLVWVKVTSVVVESYKSDKVWFNASGVKKSRPKDAYEMPREAIKVEHF* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2114 171 PANTHER DUF538 FAMILY PROTEIN 4 171 - -
Lja4g2114 171 SUPERFAMILY At5g01610-like 3 170 IPR036758 -
Lja4g2114 171 Gene3D - 28 171 IPR036758 -
Lja4g2114 171 PANTHER T31J12.3 PROTEIN-RELATED 4 171 IPR007493 -
Lja4g2114 171 Pfam Protein of unknown function, DUF538 53 160 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2114 Lja-Chr4 22693591 22696099 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2114 - - gmx:100776470 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2114 4 22693591 22696099 Lja4g2114 4 22693591 22696099 ECH