Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2111 ATGGAGTCCTCTAAGTCTAATGGATTTGATGGAGCTAGAGATGTCTCTCTTCAGGACCTTAGCAAGAGGCTTGCTGAGTTTGCTGAAGTGAGAGGATGGGATCAATATCACAGCCCAAGAAACCTTCTTTTAGCTCTTGTTGGGGAAGTGGGAGAGTTATCTGAGATCTTTCAGTGGAAAGGAGAAGTTGCAAGGGGATTACCGAATTGGAGTTGTGATGATAAGGAGCACTTAGAGGAAGAGCTTTCAGATGTTTTGCTGTATCTAGTTCGTCTTGCTGATGTTTGTGGTTTAGATCTTGGACAAGCAGCTCTTGCAAAAATAGTGAAAAATGCTCAGAAATACCCTGTTACTGATCATCATCACACAGCCACTTCCAACTTCAACTAG 390 0.4282 MESSKSNGFDGARDVSLQDLSKRLAEFAEVRGWDQYHSPRNLLLALVGEVGELSEIFQWKGEVARGLPNWSCDDKEHLEEELSDVLLYLVRLADVCGLDLGQAALAKIVKNAQKYPVTDHHHTATSNFN* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2111 129 PIRSF UCP029826_pph 7 128 IPR025984 GO:0009143|GO:0047429
Lja4g2111 129 Pfam MazG-like family 49 124 IPR025984 GO:0009143|GO:0047429
Lja4g2111 129 Gene3D - 11 122 - -
Lja4g2111 129 PANTHER DCTP PYROPHOSPHATASE 1 1 122 - -
Lja4g2111 129 SUPERFAMILY all-alpha NTP pyrophosphatases 16 119 - -
Lja4g2111 129 CDD NTP-PPase_RS21-C6_like 22 111 IPR025984 GO:0009143|GO:0047429
Lja4g2111 129 PANTHER - 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2111 Lja-Chr4 22662755 22663675 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2111 K16904 - gmx:100798010 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2111 4 22662755 22663675 Lja4g2111 4 22662755 22663675 ECH