Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2109 ATGGCATTACTGGATGCAAACGTGCCATGCAACGACTATTTTCCAGGACATTATTCGACAAAGGATGTCACTTTAGACCCTGAAGGCAGCACATGGACCTCATCTAATGTTAATATTGAACTAAGGAATGACCGCCACCAGATGGGCTCCTTTCCAGTATCATCACCATGTACCCCTTTAGACTACAACAAGGAACTCCTAAAGCAGACAATACTCAACCAAGAAGCCATATTTAAGCACCAAATTCATGAGCTCCACCGTGTTTACCACAAACAGAGGGAATTGATGGATGAAGTTAAAAGGAATGAAGTATACAAACATAATTTAAGATTGGAGGCACCACGGTCAAGTTCCGCTTTGTCATCTGAAAACACTCAAAAGATGTTTTGCTTGCCAAGCCTGCCCTGGCCAACTGCTCAATCTTCTGTTTTAATTGCTGATAGTGTCGAGTTGCTGAAAGGAAAAAGCAGACAAATATGTTCTGCGCCTGCTCCTGCTTATGCTTCAGCTGAAACTGATGAATCTTTAAAAGACTATAACCTACCAGAGTCCAAGTACAGAAAAGTTGGCAAGAAGTTATTGGATCTTCGACTTCCTGCTGATGAGTACATTAGTACTGAAGAAGATGAAGAAAATGGAAGGGTTACTGAAGTGCCCCAGGTTTCAGCTTATTCTTTGACTGGAACTTCTCAGGCTGTCCGTGACAGTCATGACAAATCATATGGAACTAATTCTAGAGGTTTTTCTGACTTAAATGTACCTTTTAAGCCTGAAGAAGCACCAGCTGCAAAGTCTTATGATTTGGGAGGGCCTACACACCAATGGAACAATCCCTTCTATGATCCGTCAAGAACAAAATTTGGATCTCAAAATTTGCCGAATGATGTCATCCAGAACTTGAGAAAGAGATCGTATCTCGAAGCTTGCTCAGATAACCCACTACTAGTACCACTCCGTGAGAACAAAAATGAGTGGCTGTCCTCAGGGCAAAGTGGTGGTTTATTGGATTCTTTTGCCAAAGATCAAATCAACCGTGGACCTTGGATAGAGAGAATATTTTCTAGCAGTGAGAGCTCTGCACAAACTCAAGGTCCCAACAGAAATGGCTTGTTTGGACCAAGCAGTGCATCGCATACATGTGCTCTACCGCAGCTTGTTTCTGGGGCTGACATGATAAGTTCTGAGATTTCACCAACACAATTATGGAAAACACCTAGCCAACTAGCAGTTCAAGCATCTTCTGCATCATCTGCATCATCAGGTCAAATTTCTAAATCATTTATGGGAATTTCTGGGTTCACTGGAGTTGACCTTTATCAGGGTACAAATGTTAAATCTGGCGCTGATTTAGAAAGCAAAAACTGTCTTCTGAGCTGCTTTGACGTCAGGTCCAAGCCGTTGGATCTTCCCTCTGTGAGTACTAATGATCTAAACAACTGTGACAACCATGGTTCATTAGATCACCATGAGCTTAGAAAGTGCGCTGAGGGTACCAAAGATGTAGGGACTCCCAAGAACCTAAACCTTAATATGATGCCTGCTGGTTGTTCTGATTCAACAGCATTTCAAAGCATTCAGATAGCAGTTGAAGAAAATAAATCTCAGGATTCATCAAGGGGGTTGAGTTGGCTCAAGGAAAAACCTAAAGGCGAAGGAAAACCCAATGAAGAGAATAAAATCTCTACCCAAATTGAAGTCTTCCAGAGCCAATCCAAAGATCAAAGTATTGAACAAATTGAGAAAGGCTGCATTTCTGATGACAAGTCACCCTGTATTGAAGTGCCTGACTTCGGGAAACAGATTCCTTCTGGTGAGCATTTGATAAAGAATGATCAGAAGAAACATGAATCTTTCGCAGGTCTGATTGACCTAAATTCAAGCATTGTAGAGGATGAGAATATGCCAATTGAAGTTGATTCTCATGCACCTGCAAGTCCAGAGAACAAGGAATGCTTGCCACCCAGAGGAGAATCTGAAGAAAACCTGCTTGAGATGCAGTCCCAATTGACAGAACAAGAGGCTCCAGAGGCGCAAGAAGAGAAGCAAATCAGAATCGCAGCAGAAGCTTTGGTTTCTATATCAGGACTTGGGGCCCACAAAGATCTCCACATGACAACTTTTTCATCATCTGAACCTTTTTTGGGCAGTCCTCTTCACTGGTTTGCTGGCATTGTTTCCGCCACAGTGGATCATCCTGATCCTGAGAAAGAAACCGAGGTGGATGCCAGTGATAAGGCTAATGATCTTGAGGGGCTTCTGCCTGCTAAAATGGATTACTTTGAGTTCATGACCTTAAAGTTGGCTGAGACAGAGGTAGAAGATTTCTGCTGTAAGAGTAAGGACCTAACTGAGCAAGTAGGTGCATCATCAACTCCACCCACACAGCTGAGGAAAGGGAGCCGGACTAATCGGGGCAGAGGGCGGCGGCGGAAGGACTTCCAAAGTGAAATCCTCCCAAGCCTTGCTTCTTTGTCTAGGCATGAGGTGACTGAGGATCTTCAGATGATTGGAGGTCTTGTAGGTTCTGCTGGTACTCACTCAGAGGCTGGTTCTCAAAGAAGTGCAGGTAGAAATGCATTGGGTAAGGGAAGGAGAAGATCCTGCACTTCAACCTCTAACATCACAGACTTGCTGTTGACCTTGAAACAGCCAACTAGTTCTTCTAAATTGGGCATTGAGAAAAGAGGCCTAGTTAGTTGGGGAAAGATATGTAAGAAGCCAAGGGGAAAGAGGCTTCCTACTTCTAATCCCAAGTTTCTTTTGAGGCAAAGTATATAA 2778 0.4327 MALLDANVPCNDYFPGHYSTKDVTLDPEGSTWTSSNVNIELRNDRHQMGSFPVSSPCTPLDYNKELLKQTILNQEAIFKHQIHELHRVYHKQRELMDEVKRNEVYKHNLRLEAPRSSSALSSENTQKMFCLPSLPWPTAQSSVLIADSVELLKGKSRQICSAPAPAYASAETDESLKDYNLPESKYRKVGKKLLDLRLPADEYISTEEDEENGRVTEVPQVSAYSLTGTSQAVRDSHDKSYGTNSRGFSDLNVPFKPEEAPAAKSYDLGGPTHQWNNPFYDPSRTKFGSQNLPNDVIQNLRKRSYLEACSDNPLLVPLRENKNEWLSSGQSGGLLDSFAKDQINRGPWIERIFSSSESSAQTQGPNRNGLFGPSSASHTCALPQLVSGADMISSEISPTQLWKTPSQLAVQASSASSASSGQISKSFMGISGFTGVDLYQGTNVKSGADLESKNCLLSCFDVRSKPLDLPSVSTNDLNNCDNHGSLDHHELRKCAEGTKDVGTPKNLNLNMMPAGCSDSTAFQSIQIAVEENKSQDSSRGLSWLKEKPKGEGKPNEENKISTQIEVFQSQSKDQSIEQIEKGCISDDKSPCIEVPDFGKQIPSGEHLIKNDQKKHESFAGLIDLNSSIVEDENMPIEVDSHAPASPENKECLPPRGESEENLLEMQSQLTEQEAPEAQEEKQIRIAAEALVSISGLGAHKDLHMTTFSSSEPFLGSPLHWFAGIVSATVDHPDPEKETEVDASDKANDLEGLLPAKMDYFEFMTLKLAETEVEDFCCKSKDLTEQVGASSTPPTQLRKGSRTNRGRGRRRKDFQSEILPSLASLSRHEVTEDLQMIGGLVGSAGTHSEAGSQRSAGRNALGKGRRRSCTSTSNITDLLLTLKQPTSSSKLGIEKRGLVSWGKICKKPRGKRLPTSNPKFLLRQSI* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2109 925 Pfam Plant protein of unknown function (DUF863) 175 333 IPR008581 -
Lja4g2109 925 Pfam Plant protein of unknown function (DUF863) 338 561 IPR008581 -
Lja4g2109 925 Pfam Plant protein of unknown function (DUF863) 560 913 IPR008581 -
Lja4g2109 925 MobiDBLite consensus disorder prediction 540 557 - -
Lja4g2109 925 MobiDBLite consensus disorder prediction 784 800 - -
Lja4g2109 925 MobiDBLite consensus disorder prediction 843 868 - -
Lja4g2109 925 PANTHER - 4 921 - -
Lja4g2109 925 MobiDBLite consensus disorder prediction 638 679 - -
Lja4g2109 925 MobiDBLite consensus disorder prediction 227 250 - -
Lja4g2109 925 MobiDBLite consensus disorder prediction 227 252 - -
Lja4g2109 925 MobiDBLite consensus disorder prediction 531 557 - -
Lja4g2109 925 MobiDBLite consensus disorder prediction 784 814 - -
Lja4g2109 925 PANTHER GB|AAF67766.1 4 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2109 Lja-Chr4 22633438 22638553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2109 - - lja:Lj4g3v1683190.1 1786.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2109 4 22633438 22638553 Lja4g2109 4 22633438 22638553 ECH