Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2107 ATGGTTTCCAAGACAAATCAAAATTCCAAAAATGTTTGTGTGATTGGAGCTGGACCATCAGGGCTAGTGGCAACGAGGGAGCTGAAAAGAGAAGGACACAAGGTGGTTGTGTTTGAGCAGAATCATGACATTGGTGGACAATGGCTCTATAACCCAAATGTACAATGTGAAGACCCTTTGGGAAAAAACCCTGTTCTCAAAGTGCATAGCAGCATTTATGAATCTTTGAGGCTCATGTCACCAAGAGAGATCATGGGGTTCACTGATTTCCCATTTTTGGTCAAGAAAGGTAGAGATATGAGGAGGTTCCCTGGCCATAGAGAGCTCCTTTTCTACCTCAATGACTTTTGTGAATGGTTTGGGTTGAGAGAGGTGATAAGGTTCAATACAAGGGTGGAATATGTTGGACCCTTGAATTATAATGGTGCTTTTAGTGGTAATGATGATTTGAAGTGGGTTGTTAGAAGCAAAGAGAAGGAGAGTGATGGGGTGGTGGAAGAAGTGTTCGACGCGGTGGTTGTTGCCTCGGGCCATTACTCTCATCCTAAATTGCCCTGCATTCAAGGAATGGATACCTGGAAAAGAAAACAAATGCATAGTCATATTTACAGGACTCCACAACCATTTGGCAAGGAGATTGTGGTGGTAGTTGGAAATTCTTTTAGTGGGCAAGAAATATCAATGGACCTAGTGAAAGTAGCAAAGGAAGTCCACCTCAGTTCCAACTCTGCTTATATTAGTGAGGGTTTATCCAAAGTCATACATAAATATCAAAACTTCCACCTTCATCCTCAGATTGACAATCTTCAAGAGGATGGACGGGTTATTTTCACGGATGGTTCAAGCATTCAAGCAGACACTATTTTATACTGTACTCTTATGTTTTTCCCTTTCTTGATACCAAAGGAATGGTTCATAGAAGATAACAGAGTTGGTCCTCTGTATGAGCACACTTTTCCCCCATCACTTGCTCCTTCTCTTTCCTTTATGGGCATCCCTTCAAAGGTCCTGGGGCCCCATTTCTTTGAGTCTCAAGCTAAATGGATAGCTCAACTACTATCTGGGAAGAAAATATTACCATCATTCGAGGAAATGATGAAGTCCATTAAGGAATTATATCATTCAAGAGAAGTAGCCAATGTTCCTAAGCGCTACACACATAGCATTGCAGATAATGATGGTTTTGAATATTTTGACAAATATGGAGACAATGCTGGATTCCCCAAATTAGAAGAATGGAGGAAAGAGATTTGCATATCATCCACAGTGAACATGTTTGCCAACTTGGAGACATTTCGTGATTCATGGAATGATGATGAGATGCTTCAGGAGGTCCTCAAAATTCCTTACTTCACTCAACTTGGAGATCATGGATTTGAAAATTGA 1386 0.4091 MVSKTNQNSKNVCVIGAGPSGLVATRELKREGHKVVVFEQNHDIGGQWLYNPNVQCEDPLGKNPVLKVHSSIYESLRLMSPREIMGFTDFPFLVKKGRDMRRFPGHRELLFYLNDFCEWFGLREVIRFNTRVEYVGPLNYNGAFSGNDDLKWVVRSKEKESDGVVEEVFDAVVVASGHYSHPKLPCIQGMDTWKRKQMHSHIYRTPQPFGKEIVVVVGNSFSGQEISMDLVKVAKEVHLSSNSAYISEGLSKVIHKYQNFHLHPQIDNLQEDGRVIFTDGSSIQADTILYCTLMFFPFLIPKEWFIEDNRVGPLYEHTFPPSLAPSLSFMGIPSKVLGPHFFESQAKWIAQLLSGKKILPSFEEMMKSIKELYHSREVANVPKRYTHSIADNDGFEYFDKYGDNAGFPKLEEWRKEICISSTVNMFANLETFRDSWNDDEMLQEVLKIPYFTQLGDHGFEN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2107 461 PIRSF FMO 8 258 IPR000960 GO:0050660|GO:0050661
Lja4g2107 461 PIRSF FMO 244 407 IPR000960 GO:0050660|GO:0050661
Lja4g2107 461 Gene3D - 186 291 IPR036188 -
Lja4g2107 461 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 5 455 - -
Lja4g2107 461 PRINTS Flavin-containing monooxygenase (FMO) signature 225 240 IPR000960 GO:0050660|GO:0050661
Lja4g2107 461 PRINTS Flavin-containing monooxygenase (FMO) signature 198 212 IPR000960 GO:0050660|GO:0050661
Lja4g2107 461 PRINTS Flavin-containing monooxygenase (FMO) signature 10 26 IPR000960 GO:0050660|GO:0050661
Lja4g2107 461 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
Lja4g2107 461 Pfam Flavin-binding monooxygenase-like 261 392 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja4g2107 461 Pfam Flavin-binding monooxygenase-like 10 243 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja4g2107 461 Gene3D - 12 435 IPR036188 -
Lja4g2107 461 PANTHER DIMETHYLANILINE MONOOXYGENASE 5 455 - -
Lja4g2107 461 SUPERFAMILY FAD/NAD(P)-binding domain 9 260 IPR036188 -
Lja4g2107 461 SUPERFAMILY FAD/NAD(P)-binding domain 266 438 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2107 Lja-Chr4 22623395 22626191 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2107 - - gmx:100817010 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2107 4 22623395 22626191 Lja4g2107 4 22623395 22626191 ECH