LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja4g2105	ATGAGGACAGAGGAAAGTACTATTAACCAGGAGAAGTCTGAGAAAACTGATCCTGAAGAAGTTGTTGAAAAAGCAAATCCTGAAGAGACATTAACTATCACAAAAGTCCCACCTAAGATCCTTTCACGTTATCTTAGTGCTCGAAAGAGTTCCTGCCATGATTTTTGCAAGTATGGTATCAAACATGCTGATGAAGAAAAACCATGGAGAAGGGTCAACACAAGGGGAAGAAAAACCAATGTTCAAACCAATGTTTTGGAAGAAAATGTAATATCTTTGGCAGGGACAAAGAAATCAGGAAGAAGTTCAAAGCCTTCTCTGACTTCAAAAGGTGAAGATCCCAGCTCTCCTATTGACATCAAGGAAGTGACAAATGAAAAAACAGTTACTTCAGAGAAAAATTCACCATCTTTTGAAGAAACAGATGTTTCAATTGAACATCACAACAGTGACCTAAGGCAAGAAGGTTCTGAGCCATCTCTTCCAGTGCAAGAATGTTCCAAAAGTCAAACCAAAAGGGGAATTGTCAAGAACAAAACTGCTTTTGCCTTTGGTTCAAGCAGCCCAAAGAGAACTGAAAGTAGAAGCAAACAGACAAAAACTGAAGGCAAGGGAAAATCAACACCACCAAGCGTTAACTTGTCTCCAAAACATAATGTCAAGAAGAAACCTTCAAGCTCACCAAGTGCTAAAACTGTCAAAAACTTGAGGGGAGTGTCTTCTCTGAAAACTCATGAGAATGTTGAAGAAATCAAACATGAAATATCCAGCAATGACAATTTACCAGACAAAATTTTGCATGTCATTGAACCTACCTCTGAAAATTTATCTGAACAACCTCCTAAGTCTCCCGGTGCAACTAAGTTGCCTTCACCCTCTCATCCATCATCAGGGGAGAAAATCTTGAAGAGGAGGACCACTAAGAAAATTGCCAGTTCTGGAATGTCTTCAACTTCAAGGAAGAACCTTAGACATGTGACATTCTCTCAAATATCTTCAGGGAACAAAGGCAAAACAAACATGGTACGTACTTCTTCAAAATCATCATCAGTTTCATCATCTGCTTCCTCATCCATATCTTCAATTTCAAAACAAAATGGTGCTGCCAAGTCTAAGTCCAACAAAGCAGGACAAAGTCATCAAGGTGAAAATGTGAAGGTGGGGTACAAAATCAGGCCAAAAATGAGCACAAAAGTTGTTGTAGGAAACAAAGTTGTTCCACCCCGGAAATTATCTTTCAGGAGAGGAAAAGTGATTGAAATTCAGCCTCAGAACAACAACATTCCAAGGAGGCTCAAATTCAAGCCAGCACGGTTGCTTGGTGCTGATGACATCAAAAGAGAAATAAATGGTGCAAGAATGAGAAGGGCCATTACCAATAAAAAAGCTGAAGATGGTGGTGAGGTAAATGCAGCTAATAATGCAAATACTGAATCTGAGAAAGCTGTGTCTAGGCACCAAACTGTGGAAGGAGGTAAGAAGAGAAGCCTTGTGAGAGATAGAAGCAAGAATATGTATGGTTCCAAATCAGCTTCTGAGAAAGTGATTTTGAGGCATCAAAATGTGGAAGGGAAGAAACAGAACTCACGTTTGTATAACAATGTGATTGAAGAGACAGCAATCAAGCTTGCTGGGCTAAGAAAGAGCAAGGTTAAGGCTCTGGTTGGTGCATTTGAAACCGTGATATCTCTTGATTCTCCTCGAGCAGAGACCAATGCTGCTGAAGCGAGCACAGCTTGTTGA	1743	0.4005	MRTEESTINQEKSEKTDPEEVVEKANPEETLTITKVPPKILSRYLSARKSSCHDFCKYGIKHADEEKPWRRVNTRGRKTNVQTNVLEENVISLAGTKKSGRSSKPSLTSKGEDPSSPIDIKEVTNEKTVTSEKNSPSFEETDVSIEHHNSDLRQEGSEPSLPVQECSKSQTKRGIVKNKTAFAFGSSSPKRTESRSKQTKTEGKGKSTPPSVNLSPKHNVKKKPSSSPSAKTVKNLRGVSSLKTHENVEEIKHEISSNDNLPDKILHVIEPTSENLSEQPPKSPGATKLPSPSHPSSGEKILKRRTTKKIASSGMSSTSRKNLRHVTFSQISSGNKGKTNMVRTSSKSSSVSSSASSSISSISKQNGAAKSKSNKAGQSHQGENVKVGYKIRPKMSTKVVVGNKVVPPRKLSFRRGKVIEIQPQNNNIPRRLKFKPARLLGADDIKREINGARMRRAITNKKAEDGGEVNAANNANTESEKAVSRHQTVEGGKKRSLVRDRSKNMYGSKSASEKVILRHQNVEGKKQNSRLYNNVIEETAIKLAGLRKSKVKALVGAFETVISLDSPRAETNAAEASTAC*	581

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	92	386	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	1	30	-	-
	Lja4g2105	580	PANTHER	EMB\|CAB62594.1	4	580	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	243	260	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	92	113	-	-
	Lja4g2105	580	SMART	CaM_binding_2	451	563	IPR012417	GO:0005516
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	203	242	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	476	499	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	309	381	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	272	294	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	64	83	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	1	26	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	155	192	-	-
	Lja4g2105	580	PANTHER	PLANT CALMODULIN-BINDING-LIKE PROTEIN	4	580	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	139	154	-	-
	Lja4g2105	580	MobiDBLite	consensus disorder prediction	483	499	-	-
	Lja4g2105	580	Pfam	Plant calmodulin-binding domain	410	495	IPR012417	GO:0005516
	Lja4g2105	580	Pfam	Plant calmodulin-binding domain	507	563	IPR012417	GO:0005516

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja4g2105	Lja-Chr4	22608518	22611936	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja4g2105	-		-	lja:Lj4g3v1683240.1	1099.35

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja4g2105	4	22608518	22611936	Lja4g2105	4	22608518	22611936	ECH