Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2077 ATGGCCTCGTCAACGAGTTTTGCACCTTTTGTATTTCTATTTCTCGTCATTGGGGCCGTTGCACGACCATTACATCCACTTCCTAGCAAAGGTCATCATGGAAGTAGGCAGCCTCTGCAGACTTGGCGCCCGTATAACATTGCACATCGAGGTTCAAATGGAGAGCTTCCCGAAGAAACTCGTCCTGCATACTTGAGAGCTATTGAAGAAGGCACAGACTTCATTGAAACTGATATCTTGTCTTCCAAAGATGGTGTTCTTATATGTTTCCATGACGTTAAACTTGATAATACTACTGACATTGCAAAATACAAAGAGTTTGCTGATCGCAAGAGAACATACGAAGTCCAAGGGGAAAACGTCACTGGCTTTTTTACTGTTGATTTCACTTTAAAGGAACTAAAGTCATTGAGAGTGAATCAGAGGTTTAGCTTCAGGGATCAACAGTATAATGGAAAATTTCAAATCATCACTTTCGAAGAGTTCATTTCCATAGCACTGGATGCACCCAGGGTTGTTGGAGTATATCCAGAGATAAAAAATCCAGTGTTTATCAATCAGCATGTGAAATGGTCAGATGGCAGAAGATTTGAGGACGTGTTTGTGGAGACACTTCAGAAACATGGATACAAGGGTTCATACCTGTCAAAAGATTGGTTGAAACAACCAGCATTCATTCAGTCGTTTGCTCCAACATCACTTGTGTATATATCAAATCAAACGGACTTGCCCAAGGTTTTCTTAATTGATGATATTACTATTCCAACACAAGACACTAACCAGTCATACTGGGAAATTACATCCGATAAATACTTTGCCTACATAAAGCAATATGTTGTCGGAATTGGACCTTGGAAGGATACAATAGCACCAGTGGTAAATAACTATGTGGTGAATCCCACTGATCTTGTTGCCAGGGCACATGCTCATAACCTGCAGGTGCATCCATATACTTACAGAAATGAGAACAAGTATTTGCATTTCAATTTTAGCCAAGATCCGTATGTGGAGTATGATTACTGGATCAACAAGGTAGGAGTTGATGGCCTTTTCACAGACTTCACTGGTAGTCTTCATAATTTTCAAGAGTGGACCTCCTATAAGAGTCAAGATGCATCCAAGCTATTGCATAAAATTGCTCAGTTGGTATCCCCTTACAAATGA 1164 0.4021 MASSTSFAPFVFLFLVIGAVARPLHPLPSKGHHGSRQPLQTWRPYNIAHRGSNGELPEETRPAYLRAIEEGTDFIETDILSSKDGVLICFHDVKLDNTTDIAKYKEFADRKRTYEVQGENVTGFFTVDFTLKELKSLRVNQRFSFRDQQYNGKFQIITFEEFISIALDAPRVVGVYPEIKNPVFINQHVKWSDGRRFEDVFVETLQKHGYKGSYLSKDWLKQPAFIQSFAPTSLVYISNQTDLPKVFLIDDITIPTQDTNQSYWEITSDKYFAYIKQYVVGIGPWKDTIAPVVNNYVVNPTDLVARAHAHNLQVHPYTYRNENKYLHFNFSQDPYVEYDYWINKVGVDGLFTDFTGSLHNFQEWTSYKSQDASKLLHKIAQLVSPYK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2077 387 PANTHER OS01G0763600 PROTEIN 1 386 - -
Lja4g2077 387 Gene3D Phosphatidylinositol (PI) phosphodiesterase 43 361 IPR017946 GO:0006629|GO:0008081
Lja4g2077 387 CDD GDPD_ScGlpQ1_like 44 355 - -
Lja4g2077 387 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 1 386 - -
Lja4g2077 387 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Lja4g2077 387 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
Lja4g2077 387 SUPERFAMILY PLC-like phosphodiesterases 43 360 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2077 Lja-Chr4 22367358 22371801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2077 5 386 Acyl Lipid Metabolism Gene Families AT1G74210 74.352 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2077 K01126 - gmx:100778145 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2077 4 22367358 22371801 Lja4g2077 4 22367358 22371801 ECH