Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2070 ATGCAGAGGCTTGTCCGCAAGGTGGTGGTTACACTCCCACACCACCACCACCACCACCATCAACCCAACCTCTCCTTCAACAACTCTCTCCGCCACCGTATCTTCCACACTAGTGGTGGCAGCGCCCACATTCACCACCACACCCCGAAACCTACACAGCTAGGTCACCCATTTCATCGTTTTCACTCATGGCACTCCTCCAACTCCAACCACACCAAAATCCGATCGTGTCTCTCCCAACCAATCATCGCATTCAACGCTCTCCGGCGAATCAGCCTCCTCAACTGCAGGCCCAAGCCTCCCGCTCTTCATTCTAGATTCAATTCCAACCGGAGTTATGGTTCTTACCGACGTCGTGGTGGTTGGAACTCTTGGTTGGACACGCTAACACCCGATAACATGGTTTTCGGCTTGATTATAGCCAATACTGCTATTTTTTTGTTATGGAGGATAGCAGATGAAAAGTTTATGATAAATAACTTTACTATCTCTTTGGACAATATTAAGAGTGGGCGCTTGCACACTTTGATTACCAATGCATTCAGTCATGTAGATGCCTGGCATATAATTTCCAACATGCTTGGACTCTACTTCTTTGGAACGAATGTTGTAAGCAATTTTGGACCTGGATTTTTGCTGAAGCTGTATCTTGCTGGGGCAGTTGGTGGTTCTGTTTTCTACTTGGTGCATCAAGCCTATAAGGCTCAATCATCAAAGGGCTGGAGATTTAGCAATCATTCAAAAGAATTGGCATTGGGGGCAAGTGGAGCTGTGAATGCAGTTATGTTGCTTCAGATATTCCTCTTTCCAAAAGCAACCATCTATTTCGATTTATTTATACCAGTTCCTGCAATCCTGTTGGGAGTCTTCATGATAGGGAAAGACATGCTCAGGATAATGGAGGGAGACACTAGTATATCAGGATCTGCACATTTGGGTGGTGCTACTGTTGGAGCTATAGCTTGGGCTCTAGTTCGGAAAGGAAGATTCTAA 993 0.4582 MQRLVRKVVVTLPHHHHHHHQPNLSFNNSLRHRIFHTSGGSAHIHHHTPKPTQLGHPFHRFHSWHSSNSNHTKIRSCLSQPIIAFNALRRISLLNCRPKPPALHSRFNSNRSYGSYRRRGGWNSWLDTLTPDNMVFGLIIANTAIFLLWRIADEKFMINNFTISLDNIKSGRLHTLITNAFSHVDAWHIISNMLGLYFFGTNVVSNFGPGFLLKLYLAGAVGGSVFYLVHQAYKAQSSKGWRFSNHSKELALGASGAVNAVMLLQIFLFPKATIYFDLFIPVPAILLGVFMIGKDMLRIMEGDTSISGSAHLGGATVGAIAWALVRKGRF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2070 330 PANTHER RHOMBOID PROTEASE 23 326 - -
Lja4g2070 330 Pfam Rhomboid family 168 327 IPR022764 GO:0004252|GO:0016021
Lja4g2070 330 PANTHER RHOMBOID-LIKE PROTEIN 12, MITOCHONDRIAL 23 326 - -
Lja4g2070 330 SUPERFAMILY Rhomboid-like 132 328 IPR035952 -
Lja4g2070 330 Gene3D - 132 324 IPR035952 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2070 - - lja:Lj1g3v0809690.1 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2070 4 22295405 22302040 Lja4g2070 4 22295405 22302040 ECH