Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2042 ATGTTAAACATTGTGACCATGATGATTTCTGTCTTTGCAACTTTCATCTTCCTGGTTTGTACTCCATCAGCAGCTCTATTACTCAACAGGCTACCGCTACCTTCACCTCTTACAGGCCCTGAGGCACTTGCATTTGACAGGAATGGTTCAGGGCCTTATGTTAGTTCTTCTGATGGAAGAATTTTCAAATATGTTGGTCCAAATGAGGGTTTCCAGGAATATGCTTACACTTCCCCTAACAGGAACAAGATAACTTGTGATGGCCTTGCTGACTTCTCAACACTCCAAGCTACATGTGGGAGGCCTTTAGGATTGGGTTTCAATCACCAGACAGGGGAATTGTATGTAGCTGATGCCTATTTTGGGCTTCTCAAGATTGGTGCCAATGGAGGGCCTCCAATCCAGTTAGTTGGACCTGCACAAGGCAATTCTTCTATGTTTGCTGATGGTTTGGATATAGACCCTGACACAGGAATCGTTTATTTCACTGAAGCCAGTGCTAATTTCCAGATCAAAGATATCAGTACAATTCTGACCAGTGGAGATAGTACTGGAAGACTTCTCAAATATGATCCAAGCACCAACCAAACAACAGTGTTGCTGAGTGATCTTGCTGTGCCAAATGGGGTAGCAGTGAGCAGAGATGGTTCATTTGTGCTTGTTAGTGAGTTCATGGAAAACAGGATCCAGAGATTCTGGCTGAAAGGGCCAAGAGCAAATTTATCAGACACATTCATAAGACTTGCAGGAAAACCAGATAACATCAAGAGGAATTCTAGAGGCCAGTTCTGGGTGGCAGTGAATAGTTATTTAGGACTGCCTCGCCGCCCGATCCGTCGAGTTTTGCCTTCAGGAGTTAGAATCAGTGAGAACGGTTTGGTTTTGCAGGTTGTGTCTCTTGCTCAAGAGTATGGCACTGAACCAGCAAGTGAGGTTCAAGAGTTTAATGGGACACTCTATGCTGGGTCTCTCTTTGTTTCCTATGCTAGCATTTTCATCCCCTAG 1005 0.4438 MLNIVTMMISVFATFIFLVCTPSAALLLNRLPLPSPLTGPEALAFDRNGSGPYVSSSDGRIFKYVGPNEGFQEYAYTSPNRNKITCDGLADFSTLQATCGRPLGLGFNHQTGELYVADAYFGLLKIGANGGPPIQLVGPAQGNSSMFADGLDIDPDTGIVYFTEASANFQIKDISTILTSGDSTGRLLKYDPSTNQTTVLLSDLAVPNGVAVSRDGSFVLVSEFMENRIQRFWLKGPRANLSDTFIRLAGKPDNIKRNSRGQFWVAVNSYLGLPRRPIRRVLPSGVRISENGLVLQVVSLAQEYGTEPASEVQEFNGTLYAGSLFVSYASIFIP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2042 334 Pfam Strictosidine synthase 149 237 IPR018119 GO:0009058|GO:0016844
Lja4g2042 334 PANTHER STRICTOSIDINE SYNTHASE-RELATED 7 332 - -
Lja4g2042 334 Pfam Strictosidine synthase-like, N-terminal 29 63 - -
Lja4g2042 334 Gene3D - 22 333 IPR011042 -
Lja4g2042 334 SUPERFAMILY Calcium-dependent phosphotriesterase 30 325 - -
Lja4g2042 334 PANTHER SMP-30/GLUCONOLACONASE/LRE-LIKE REGION PROTEIN 7 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2042 Lja-Chr4 21734664 21736117 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2042 - - lja:Lj0g3v0322739.1 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2042 4 21734664 21736117 Lja4g2042 4 21734664 21736117 ECH