Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2040 ATGATGATTTCTGTCTTTGCAACTTTCATCTTCCTCGTTTGTACTCCATCAGCAGCTCTATTACTCAACAGGCTACCGCTACCTTCACCTCTTACAGGCCCTGAGGCACTTGCATTTGACAGGAATGGTTCAGGGCCTTATGTTAGTTCTTCTGATGGAAGAATTTTCAAATATGTTGGTCCAAATGAGGGTTTCCAGGAATATGCTTACACTTCCCCTAACAGGAACAAGACAACTTGTGATGGCCTTGCTGACTTCTCAACACTCCAAGCTACATGTGGGAGGCCTTTAGGATTGGGTTTCAATCACCAGACAGGGGAATTGTATGTAGCTGATGCCTATTTTGGGCTTCTCAAGATTGGTGCCAATGGAGGGCCTCCAATCCAGTTAGTTGGACCCGCACAAGGCAATTCTTCTATGTTTGCTGATGGTTTGGATATAGACCCTGACACAGGAATCGTTTATTTCACTGAAGCCAGTGCTATTTCCAGATCAAGTGAAGATATCAGTACAATTCTGACAAGTGGAGATAGTACTGGAAGACTTCTCAAATATGATCCAAGCACCAACCAAACAACAGTGTTGCTGAGTGATCTTGCTGTGCCAAATGGGGTAGCAGTGAGCAGAGATGGTTCATTTGTGCTTGTTAGTGAGTTCATGGAAAACAGGATCCAGAGATTCTGGCTGAAAGGGCCAAGAGCAAATTTATCAGACACATTCATAAGACTTGCAGGAAAACCAGATAACATCAAGAGGAATTCTAGAGGCCAGTTCTGGGTGGCAGTGAATAGTTATTTAGGACCGCCTCGGCGCCCGATCCGTCGAGTTTTGCCTTCAGGAGTTAGAATCAGTGAGAACGGTTTGGTTTTGCAGGTTGTGTCTCTTGGTCAAGAGTATGGCACTGAACCAGCAAGTGAGGTTCAAGAGTTTAATGGGACCCTCTATGCTGGGTCTCTCTTTGTTTCCTATGCTAGCATTTTCATCCCCTAG 990 0.4495 MMISVFATFIFLVCTPSAALLLNRLPLPSPLTGPEALAFDRNGSGPYVSSSDGRIFKYVGPNEGFQEYAYTSPNRNKTTCDGLADFSTLQATCGRPLGLGFNHQTGELYVADAYFGLLKIGANGGPPIQLVGPAQGNSSMFADGLDIDPDTGIVYFTEASAISRSSEDISTILTSGDSTGRLLKYDPSTNQTTVLLSDLAVPNGVAVSRDGSFVLVSEFMENRIQRFWLKGPRANLSDTFIRLAGKPDNIKRNSRGQFWVAVNSYLGPPRRPIRRVLPSGVRISENGLVLQVVSLGQEYGTEPASEVQEFNGTLYAGSLFVSYASIFIP* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2040 329 Pfam Strictosidine synthase-like, N-terminal 23 57 - -
Lja4g2040 329 Pfam Strictosidine synthase 143 232 IPR018119 GO:0009058|GO:0016844
Lja4g2040 329 Gene3D - 16 328 IPR011042 -
Lja4g2040 329 PANTHER STRICTOSIDINE SYNTHASE-RELATED 1 327 - -
Lja4g2040 329 PANTHER SMP-30/GLUCONOLACONASE/LRE-LIKE REGION PROTEIN 1 327 - -
Lja4g2040 329 SUPERFAMILY Calcium-dependent phosphotriesterase 24 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2040 Lja-Chr4 21717136 21718570 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2040 - K01757 lja:Lj0g3v0322739.1 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2040 4 21717136 21718570 Lja4g2040 4 21717136 21718570 ECH