Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2037 ATGTTAAACATTGTGACCGTGATGATTTCTGTCTTTGCAACTCTCATCTTCCTGGTTTGTACTCCATCAGCAGCTCTATTACTCAACAGGCTACCGCTACCTTCACCTCTTACAGGCCCTGAGGCACTTGCATTTGACAGGAATGGTTCAGGGCCTTATGTTAGTTCTTCTGATGGAAGAATTTTCAAATATGTTGGTCCAAATGAGGGTTTCCAGGAATATGCTTACACTTCCCCTAACAGGAACAAGACAACTTGTGATGGCCTTGCTGACTTCTCAACACTCCAAGCTACATGTGGGAGGCCTTTAGGATTGGGTTTCAATCACCAAACAGGGGAATTGTATGTAGCTGATGCTTATTTTGGGCTTCTCAAGATTGGTGCCAATGGAGGGCCTCCAATCCAGTTAGTTGGACCTGCACAAGGCAATTCTTCTATGTTTGCTGATGGTTTGGATATAGACCCTGACACAGGAATCGTTTATTTCACTGAAGCCAGTGCTAATTTCGAGATCAAAGATATCAGTACAATTCTGACCAGTGGAGATAGTACTGGAAGACTTCTCAAATATGATCCAAGCACCAACCAAACAACAGTGTTGCTGAGTGATCTTGCTGTGCCAAATGGGGTAGCAGTGAGCAGAGATGGTTCATTTGTGCTTGTTAGTGAGTTCATGGAAAACAGGATCCAGAGATTCTGGCTGAAAGGGCCAAGAGCAAATTTATCAGACACATTCATAAGACTTGCAGGAAAACCAGATAACATCAAGAGGAATTCTAGAGGCCAGTTCTGGGTGGCAGTGAATAGTTATTTAGGACCGCCTCGGCGCCCGATCCGTCGAGTTTTGCCTTCAGGAGTTAGAATCAGTGAGAACGGTTTGGTTTTGCAGGTTGTGTCTCTTTCTCAAGAGTATGGCACTGAACCAGCAAGTGAGGTTCAAGAGTTTAATGGGACACTCTATGCTGGGTCTCTCTTTGTTTCCTATGCTAGCATTTTCATCCCCTAG 1005 0.4448 MLNIVTVMISVFATLIFLVCTPSAALLLNRLPLPSPLTGPEALAFDRNGSGPYVSSSDGRIFKYVGPNEGFQEYAYTSPNRNKTTCDGLADFSTLQATCGRPLGLGFNHQTGELYVADAYFGLLKIGANGGPPIQLVGPAQGNSSMFADGLDIDPDTGIVYFTEASANFEIKDISTILTSGDSTGRLLKYDPSTNQTTVLLSDLAVPNGVAVSRDGSFVLVSEFMENRIQRFWLKGPRANLSDTFIRLAGKPDNIKRNSRGQFWVAVNSYLGPPRRPIRRVLPSGVRISENGLVLQVVSLSQEYGTEPASEVQEFNGTLYAGSLFVSYASIFIP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2037 334 Gene3D - 22 333 IPR011042 -
Lja4g2037 334 PANTHER SMP-30/GLUCONOLACONASE/LRE-LIKE REGION PROTEIN 8 332 - -
Lja4g2037 334 SUPERFAMILY Calcium-dependent phosphotriesterase 30 325 - -
Lja4g2037 334 Pfam Strictosidine synthase-like, N-terminal 29 63 - -
Lja4g2037 334 Pfam Strictosidine synthase 149 237 IPR018119 GO:0009058|GO:0016844
Lja4g2037 334 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2037 Lja-Chr4 21514649 21516103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2037 - K01757 lja:Lj0g3v0322739.1 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2037 4 21514649 21516103 Lja4g2037 4 21514649 21516103 ECH