Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2035 ATGTTCCGCACAAGCAACACCGTCGTCGGCTTCCTCAACATTCTCTCCCTCCTCCTCGGCCTCACCGCCGTCGTAACCGCCGCCTACATCCACCAGCACGGCGGATCCGACTGCCAGAAAGTCTTCCAATACCCTCTCCTCATCGGCGGCGTCTTCGTTGTCCTCGTCTCCACCCTCGGCATCGCGGGATCACTCTACCGCATCAACACCGCGCTCTACGCTTACCTCGTGGTGACTTTCTTGGTGGTGGTTGGGCTCGCCTTCTTCACCGTCTTCGCGCTGTTTGTCACCAACAGGAAGGTTGGTCAGCAGGTTTCCAACAAGGGATATGGTGAGTACAGAGTCACCGATTTCTCCCACTGGCTGCAGCGGTATGTTGTCAATGATAAGAACTGGGATGAGGTTAAGAGTTGCCTCGTCGACGCACATGTTTGCCAGAACCTCGCCGTTAACGGTGGCCGGAACAATGACTCTCTCATTTTCAAACACTTGTCCACCACACAGTCTGGATGCTGCAAGCCACCGGTGTACTGTGGATTCAGGATGAAGAATGCAACGTTCTGGGAGGTGCCAAAGAATGGTCCAGCAGCGAACAATTCAGATTGCAAGACATGGGACAACAAGCAGGACAAGCTGTGCTATGATTGCAATGCATGCAAAGGAGGGGTTTTGGCCAACATCAGGAACCAGTGGAGACATTTAACCATATTCAATGGCCTTGTGCTTGCACTCGTCACCACCATTTATGTTCTGGGTTGCTATGCCATCAAGAACAACCGATGGGACTTGCGCCGCGAGCACCAAACTCCCGCTGCAGGACACCCTTGA 828 0.5374 MFRTSNTVVGFLNILSLLLGLTAVVTAAYIHQHGGSDCQKVFQYPLLIGGVFVVLVSTLGIAGSLYRINTALYAYLVVTFLVVVGLAFFTVFALFVTNRKVGQQVSNKGYGEYRVTDFSHWLQRYVVNDKNWDEVKSCLVDAHVCQNLAVNGGRNNDSLIFKHLSTTQSGCCKPPVYCGFRMKNATFWEVPKNGPAANNSDCKTWDNKQDKLCYDCNACKGGVLANIRNQWRHLTIFNGLVLALVTTIYVLGCYAIKNNRWDLRREHQTPAAGHP* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2035 275 PANTHER TETRASPANIN-8 1 262 - -
Lja4g2035 275 Pfam Tetraspanin family 6 250 IPR018499 GO:0016021
Lja4g2035 275 PANTHER TETRASPANIN-8-RELATED 1 262 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2035 Lja-Chr4 21434504 21435958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2035 1 260 Miscellaneous Gene Families AT1G18520 47.368 1.34e-80 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2035 - - gmx:100815322 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2035 4 21434504 21435958 Lja4g2035 4 21434504 21435958 ECH