Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2022 ATGCCGGTTTCAACTCGGTCTCAGCTCAGAAACCCGCACCATGGCCTCAAGGAGAAGCTGAAAACGCTCACCCTCTTGTACGAGCAGCAGAAGCAAGCCTCTGCGGCTCTCAAGAACGCGCCTCTGAGGGCTCCCTCAGAGAAGGCTGTGATGCGGGAGAATGCGATGCCGAATACGACCGTTACGAGAACGTTCGTGCTCCCTCAGCCGCCTTCGGCGGCGGACGACGACGCGAAGGAGAATCAGAACAGCCTTGTTCTCGGGCCTGATCGAATTGTCGGGTTTTCGTGCCCCAGGAAGGTCACGACGACGGCGCCGCAGGTTTCTATTTCGAGCTCGGCTACTGTTGCTAGGAAACTTTCGATGGGGAGAGGGATCGCGGAGGAGGCGGGGAAGAAAGATGGGAGCAGGATTATGGTGTTTGTGAGGGTGAGGCCGATGAACAAGAAGGAGAAGGAAGCGGGTTCACGGTGCAGTGTGAGAATTGTGAATCGCCGTGATGTTTATCTCACTGAATTTGCCAATGAGAATGATTATCTCAGGCTCAATAGGATTCGGGGACGCTGCTTCACCTTTGATGCTGCATTTCCAGATTCTGCAACTCAGCTTGAAGTTTATTCTACCTCAACCTCAGAACTTTTGGAAGCAGTTCTGCAGGGGAGGAATGGGTCAGTTTTCTGTTATGGCGCCACGGGAGCTGGAAAGACCTATACCATGCTTGGCACGATGGAGAATCCAGGGGTGATGGTTTTGGCGATTAAGGATCTTTTCAGTAAAATCAGGGAGAGGAGTTTTGATGGAAGCCATGTGGTTCAACTGTCCTATCTCGAGGTTTACAATGAAACTGTCAGGGATTTACTTTGCCCTGGAAGGCCTCTGGTTCTTAGAGAAGATAAACAGGGGATTGTGGCTGCAGGTCTTACCCAATATAGAGCTTATTCTACAGATGAAGTGATGGCATTGCTTCAACAAGGAAATCTGAACCGAACCACAGAACCAACTCGTGCAAATGAAACATCTTCCCGTTCTCATGCAATTTTGCAGGTTGTGGTTGAATACCGAGTTAGAGATGCTGCGATGAACATTATTAACCGAGTGGGCAAGCTCTCTCTAATTGATCTTGCAGGTTCAGAGAGAGCTCTAGCCACAGATCAAAGAACACTCAGATCTCTTGAGGGTGCCAATATAAACCGGTCACTTCTCGCACTAAGCAGCTGCATTAATGCTCTTGTTGAAGGCAAGAAACACATACCGTATCGAAATTCAAAACTCACCCAGCTTCTCAAGGATTCACTTGGAGGAACTTGTAATACGGTCATGATTGCAAACATTAGTCCAAGTAACCTCTCTTTTGGTGAAACTCAAAACACTGTTCATTGGGCCGATAGAGCTAAGGAGATTCGAGCAAAGGTAAGCAATGCCAATGAGGAAATATTACCGGTGCCTGAGACAGAAACTGATCAAGCCAAGCTGCTACTTGAGCTGCAAAAGGAGAATCGTGAATTGAGAATGCAGCTAGTGAGGCAACATCAGAAGCTGATGACTCTAGAAGCACAGTCCTTAGCTTCACATTCCTCTCCGACACCGCCTTCAGCCACATCTCTTTCCACTCCTCCAACTTCTGCCCAGCCAAGTGAGAAACGAAGGACTAGATCCTCTTTCTTGGCCGGAACTTGCTTCACTCCAGAAAACAAGAAGAAGGGAGCTGAGCTAGCTGTCAGGACACTTGAACGAACTGTGAAAGCACTAGAAGCGGAAATAGATAGAATGAAGAAAGAACATACCTTGCAGCTAAAGCAAAAAGATAATCTCATTCAACAGCTTTCACAAAAGGGTGGAAAACAAGAATCAACAACTGGGGGAGTGGGAAAGAGAGCTAGTCTACAGGCAAAAGAGACACCATTGAAGAGTCCAATTCACCGCTTTCGATCTCCGCCAGCCCCAACTGCCAAGAAACGAAGCTTTTGGGACATAACCACGACAAATAGCCCCTCAGTTACTACATTAAATGGGAGAAAAACTAGAAGTCATGTCCTTTCTGAACCTACTGCACCTCCTCCATCCATGCTTCTTCAGCCGGGTTTTGCTCGTCAAAAAGCCAATAATTAA 2109 0.4784 MPVSTRSQLRNPHHGLKEKLKTLTLLYEQQKQASAALKNAPLRAPSEKAVMRENAMPNTTVTRTFVLPQPPSAADDDAKENQNSLVLGPDRIVGFSCPRKVTTTAPQVSISSSATVARKLSMGRGIAEEAGKKDGSRIMVFVRVRPMNKKEKEAGSRCSVRIVNRRDVYLTEFANENDYLRLNRIRGRCFTFDAAFPDSATQLEVYSTSTSELLEAVLQGRNGSVFCYGATGAGKTYTMLGTMENPGVMVLAIKDLFSKIRERSFDGSHVVQLSYLEVYNETVRDLLCPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMALLQQGNLNRTTEPTRANETSSRSHAILQVVVEYRVRDAAMNIINRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGTCNTVMIANISPSNLSFGETQNTVHWADRAKEIRAKVSNANEEILPVPETETDQAKLLLELQKENRELRMQLVRQHQKLMTLEAQSLASHSSPTPPSATSLSTPPTSAQPSEKRRTRSSFLAGTCFTPENKKKGAELAVRTLERTVKALEAEIDRMKKEHTLQLKQKDNLIQQLSQKGGKQESTTGGVGKRASLQAKETPLKSPIHRFRSPPAPTAKKRSFWDITTTNSPSVTTLNGRKTRSHVLSEPTAPPPSMLLQPGFARQKANN* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2022 702 MobiDBLite consensus disorder prediction 607 702 - -
Lja4g2022 702 MobiDBLite consensus disorder prediction 518 561 - -
Lja4g2022 702 MobiDBLite consensus disorder prediction 654 677 - -
Lja4g2022 702 PANTHER KINESIN-LIKE PROTEIN 124 695 - -
Lja4g2022 702 MobiDBLite consensus disorder prediction 518 559 - -
Lja4g2022 702 ProSitePatterns Kinesin motor domain signature. 367 378 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja4g2022 702 Coils Coil 492 519 - -
Lja4g2022 702 Pfam Kinesin motor domain 143 467 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2022 702 Gene3D Kinesin motor domain 128 473 IPR036961 -
Lja4g2022 702 PRINTS Kinesin heavy chain signature 417 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2022 702 PRINTS Kinesin heavy chain signature 334 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2022 702 PRINTS Kinesin heavy chain signature 368 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2022 702 PRINTS Kinesin heavy chain signature 220 241 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2022 702 PANTHER KINESIN-RELATED 124 695 IPR027640 GO:0003777|GO:0007018
Lja4g2022 702 MobiDBLite consensus disorder prediction 607 624 - -
Lja4g2022 702 Coils Coil 566 611 - -
Lja4g2022 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 512 IPR027417 -
Lja4g2022 702 SMART kinesin_4 135 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g2022 702 ProSiteProfiles Kinesin motor domain profile. 137 467 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2022 Lja-Chr4 20981549 20985529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2022 95 519 Miscellaneous Gene Families AT2G21380 34.763 2.14e-59 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2022 K10401 - gmx:100798358 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2022 4 20981549 20985529 Lja4g2022 4 20981549 20985529 ECH