Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2019 ATGGCTCATGATTCAGAGAAGAGGTTCCGCTCCATCATGAGCAAGCTCTTCCACCCTCCCAATTCACCATCCAATCCTTCCCCTTCCACCCCCAGTTCATCATCTGGGGTACAACTATCAGGGGGTAAGAAACGGCCTTACCAGTCAATTGCTACAGGGGTGATGGAGCTGAATCGTAGAGGGGATGTTGCTGAGGGGCATCAGTCGTCCTCAGCTGACTCCCAAGGGCAGCTCTGTCGGCCGTGGGATCGTGGTGATTTATTGAGGAGATTGGCCACATTCAAATCTATATCATGGTTTGCTAAACCCAAGATAGTGAGTGCAGTAAATTGTGCTAGAAGAGGTTGGATCAATGTGGACGTTGACACCATAGCATGTGAAGCATGTGGTGCACGTCTTCTTTTTTCTACATCAGCATCTTGGAATCAGCAGCAGGTGGAGAAGGCAGCCTTGGTCTTTAGCTTAAAGTTGGATAGTGGACATAAATTACTTTGTCCATGGATTGACAATGCCTGCAATGAAACACTCGCAAGATTTCCTCCTACAGCTCCTCCTGTATTAGTTGACAATTTCAGAGAACGATGCTCTGCTCTCTTGCAACTGTCAGCTCTTCCTCGTGTTTCATCTTCAGCAATAGACTACATGCAAAGCCCATTTCTGGAGGACTTTCTTGGACAATCTTTGATGCTTGAGTGTGGAGATGGATCTGCCAATAGTTCTGAGATAGAAGTTAGTAGTCAAGCGGAACTGAAATCGTATTGTCAGGCTCAAAAGCTTATAAGTTTATCCGGTTGGAAACTTCGTTGTCTACCTTATGTAGTTGATTGCAAGGATTTATCAGATCAATCTCTTAAAAAGAAAACTATCCAAGAATGTTCCCAAGTAGTTGCTGATGGGAAAAATAATAATCTGATTGTCTATTCTGCTGGGACGGATGAAAATTCCAAGGATTTTAATTGGGAACAGATAGATCCCCATTCTGCAGTTTTAGATTGCACCTTATGTGGAGCAACTGTTGGATTGTGGGCATTTAGTACACTTCCACGGCCCGTGGAATCAATCAGATTAGTGGGATATGCAGAGGTGAATGGTGAAAAGGATTCTGTGACCCCCAATTCATTCATTAGAAATGATCTTGAAAATAGGCAGGGTGTAAATAACAACATGCCTGACATTGCAAATTCATCAAAGGGTACACCTTCGAGTCTAAATATGACAATTGCAGGGGGTCCTCCCCCAACAAAGCAGAACTTTAAAGCAATAATATCTCTGCCTATTATTGGTCAGAATTTAAGGACCCGTCTTTCTTATGATTCTGATTTTAGAGATCATGTTTTTGTCGTTGGAGGTGATATTCAGTCCGATTCACAGGAAGGGATCAGAATTCAGGAGACAAATGATAACACAGATCCTACTGGACAACTTGTTCCTGTGACATCTGAAATCAGGAAAATTCCAGGTTATGAAACTGGTTCTCAAGCAAACATTCATGATTCAGTTGTAGACAATGTTATGGAGGGCATTGACTATGCAGGACAACCTTCCGGTTCTAAGGATAAGATGCCTGCACACACAGAGACAGATGGGTTGAAGTGTTCTTCAGCTGGACACCCTAGTAGCTTTAAGAAAGACTTGACAGAAGATGAAGCACTTCCTGTTCCACATAAGTCTTTGGATAAGGAAGTAAGTATAGTTGAAGCTTCTGGGGTCAAAGACAGAGTAGAGAATCCCATTAGCAGTGAAAATGTGCATAGTAGCTTAGGTAAGTTTAAGAGTCCAACAGGGTCTGATAAAGCAATAGAATTCGACCCAATCAGGCAGCATAGACACTTCTGCCCCTGGATCGCATCGATAGATGGTGGCGAGCCTGGGTGGAAACAAACATTATCTGCTCTGTATCATCAGCAAAAACATTTGCCTCATTCACCAAACAGTTCTCCAACATCTATGTCCATTATAAAGGTAGATGACCCTGTCGGTTCTGTTAGAAAGCTTTTCATGTCTCCATCAAAGAAAAGAGTGAAGCTCAATCACATTTCAGGCCACAATGCAGAGCATAGGTAG 2064 0.4297 MAHDSEKRFRSIMSKLFHPPNSPSNPSPSTPSSSSGVQLSGGKKRPYQSIATGVMELNRRGDVAEGHQSSSADSQGQLCRPWDRGDLLRRLATFKSISWFAKPKIVSAVNCARRGWINVDVDTIACEACGARLLFSTSASWNQQQVEKAALVFSLKLDSGHKLLCPWIDNACNETLARFPPTAPPVLVDNFRERCSALLQLSALPRVSSSAIDYMQSPFLEDFLGQSLMLECGDGSANSSEIEVSSQAELKSYCQAQKLISLSGWKLRCLPYVVDCKDLSDQSLKKKTIQECSQVVADGKNNNLIVYSAGTDENSKDFNWEQIDPHSAVLDCTLCGATVGLWAFSTLPRPVESIRLVGYAEVNGEKDSVTPNSFIRNDLENRQGVNNNMPDIANSSKGTPSSLNMTIAGGPPPTKQNFKAIISLPIIGQNLRTRLSYDSDFRDHVFVVGGDIQSDSQEGIRIQETNDNTDPTGQLVPVTSEIRKIPGYETGSQANIHDSVVDNVMEGIDYAGQPSGSKDKMPAHTETDGLKCSSAGHPSSFKKDLTEDEALPVPHKSLDKEVSIVEASGVKDRVENPISSENVHSSLGKFKSPTGSDKAIEFDPIRQHRHFCPWIASIDGGEPGWKQTLSALYHQQKHLPHSPNSSPTSMSIIKVDDPVGSVRKLFMSPSKKRVKLNHISGHNAEHR* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2019 687 MobiDBLite consensus disorder prediction 508 541 - -
Lja4g2019 687 Pfam C3HC zinc finger-like 81 205 IPR012935 GO:0008270
Lja4g2019 687 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 674 - -
Lja4g2019 687 MobiDBLite consensus disorder prediction 28 42 - -
Lja4g2019 687 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2019 Lja-Chr4 20940949 20944991 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2019 - - lja:Lj4g3v1784840.1 1352.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2019 4 20940949 20944991 Lja4g2019 4 20940949 20944991 ECH