Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2016 ATGACATTTGTCAAAAAATTAGATCATGATAAGTGTTTTCGTAGTGAGAAAGAGAGAGTAAGAGAGAGAATGGATGTTAGGAACATAGCAGTGGTGGTGGAAGATGTTGATGCAGCTAGAACTGCATTATTGTGGGCACTTCACAATATCATTCGCTATGGTGATATAATCACCTTGATCCATGTCTACCCTTTAACAAGAACCAAAACCAAAAACAAAGCTCGTCTTCTTCGCCTCAAAGGATTCCAATTAGCACTTTCCTTCCAAGAAATCTGCAACAACTTCTCCAATACAAAGGTTGAGATTGTTGTTGCTGAAGAGGACAGAGAAGGAATGAAGGTTGTGGCTATGGTTAAAGAGATTAAACCTTCAATGCTTGTAGTTGGACTCCATGATCATAGTTTTATTTACAAGTTGGCAATGGAGCATAAGAGTATAGCTAGCTACTTCAACTGCAGAGTTCTTGCCATCAAGCAGCCTCCAGTGTCCCCAGTCAGCTCCATGGTTTCTGGAGTTGGTGTCCTAGATAGTTCAACAGAAATGGACTTTTCACAGATTCACATTTGTAGATTACAAGTTTCTGATACCCTTCCACAAAAAGTGAAGTACCGAATTTGCCCTGATCCAGCTGCAATTATTTGTAGATTAAGGAGGTCAAGGAGAAGGTGA 669 0.4006 MTFVKKLDHDKCFRSEKERVRERMDVRNIAVVVEDVDAARTALLWALHNIIRYGDIITLIHVYPLTRTKTKNKARLLRLKGFQLALSFQEICNNFSNTKVEIVVAEEDREGMKVVAMVKEIKPSMLVVGLHDHSFIYKLAMEHKSIASYFNCRVLAIKQPPVSPVSSMVSGVGVLDSSTEMDFSQIHICRLQVSDTLPQKVKYRICPDPAAIICRLRRSRRR* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2016 222 CDD USP_Like 28 136 - -
Lja4g2016 222 Pfam Universal stress protein family 27 157 IPR006016 -
Lja4g2016 222 Gene3D HUPs 25 159 IPR014729 -
Lja4g2016 222 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 24 222 - -
Lja4g2016 222 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2016 Lja-Chr4 20930799 20934402 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2016 - - gmx:100801011 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2016 4 20930799 20934402 Lja4g2016 4 20930799 20934402 ECH