Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2015 ATGGACTGGGGTGGTGGTGTTATTAACAACAATAACAATAACAATTTCAGAACAACTTACAAAGATGATCATAAATCCATGATGGACCTGGCACTCATTTCAAACATGGATCCTGTCAATATTGGTTTGGGTTGTTCAGAAAAGCAAGTTCCTGTCACTTCACTCAAGCCAAGGAAGAAGACAATGACATCAGTTTACTTGAAGTTCTTTGAGACTGCTGCTGATGGCAAGACTAGGAGATGCAAGTTTTGTGGACAGAGCTATTCGATTGCGACCGCCACAGGAAATTTGGGGAGGCACCTTGCTAATCGCCATCCAGGCTATGATAAGTCAGGGGATGCTGTCAGCAATTCGGCATCCCGGAGCACTGTTACAATCAAGAAGTCTCAGCCTCAAGGAAAACCAAACCAGGTGGATTATGACCATCTAAATTGGTTAATCGTTAGGTGGCTTGTTTTAGCTTCTCTCCCTCCCTCAACCCTGGAAGAGAAGTGGCTTGTGAACTCCTACAAGTTTCTTAATCCATCTATACAACTCTGGCCAAGTGACAAATACAGAACTGTACTTGATGAAGTTTTCAGAAGCATGAGAGAAGATGTAAGAGCATTGTTAGAACAGGTTTCTACCAAGCTCTCCATCACACTTGATTTCTGGACTTCCTTTGAACAGATCTTCTATATGAGCATAACATGTCAGTGGATCGACGAAAACTGGTCCTTCCAAAAGTTGCTTCTTGATATCTGTCGCATACCTTATCCATGTGGCGGTGCAGAGATCTATCGTTGCCTTGTAAAAGTTCTTAAATTTTACAATATTGAAAACAGAGTCCTGTCCTGTACTCATGATAATAGTTCAAGTGCCATACTTGCCTGTCATACGTTGAAGGAGGACTTGGATGATCAGAAAATTGGGCCATTCTGTTATATTCCCTGCGCTGCCCGAACTTTGGACCAGATAATAGATGATGGGTTAAGATCCACTAAACAAGTAATTTCAAAGATCCGTGAATTTGCAATAGAGTTAAATTCCTCATCAGTGATCTCTGAGGATTTCATTCAATTATCTACAGCTTATCAGGAAGGTACCTGGAAATTTCCTCTTGATGTTTCACCAAGGTGGAGTGGAAACTACCAGATGCTTGATCTTTTTCGCAAGGCAGGTAAATCAATGGATGCTGTTATTCGTAAATATGAGGATACGCTGGGGAGTAAGATGCTGCTGGGCTCTTCTGACAAAAGTTTAGGTAACATCATGCATCAGTTTCTTGAACCATTCCACAAGACCACAAACGACATCTGCACGAGTAAGGTCCCAACAGTTGGGCTTGTCCTTTTCTTCATGGATCACATCTCAGAAACAATTGCTACCTGCAGAGAATCACGTCATAGCCCGGAATGGCTAAAAAGTGCTGCAGAAGAAATGGCTAAGAAGGCCAGGAATTATATTAATCAGGTTTGCAACATATTTACGTACATGACAGCAATTCTAGATCCTCGATTAAAGGCAGAACTGATCCCTGATAGTTTAAATTCTGAAAGTTTTCTGGACGAAGCAAGAACTCATTTCATGAGAAATTATTCTACCAGCCATTTCTCATCCATGAGTTCTGGATACAATGCTCAAGAAATTGAAGATGGAGGAAGCGTTTCGTTTGCTGAGGAAATAGCTCGGAAGAAACGAAGAACGAGTATGAGCTCCACCACAGATGAGCTTACACAGTACCTCTCAGAGGCTCCGGCTCCTATGGCTATACCAACAGATGTTCTAGAGTGGTGGAAGGTTAACAGCACACGCTACCCTAGACTATCTATGATGGCTAGAGATTTCTTGGCTGTGCAGGCAACTTCAGTTGTGCCTGAAGAAATTTTCTGTGGCAAGGGTGATGCAATTGACAAGCAACGGTTCTGTATGCCGCTTGATACCACGCAAGCTATTCTTTGTATCAAGTCATGGATTGAGGTTGGCATCAAGTTTAAGTTTAAGTCGACTGAGATAGATTATGAGAGGTTGATGGAACTAGCAGCGGCTGCAGCTTCAACAGATAATAGCCCTGTGAGTTCTGTTGAGAAGAAGCAAAAATAA 2082 0.4217 MDWGGGVINNNNNNNFRTTYKDDHKSMMDLALISNMDPVNIGLGCSEKQVPVTSLKPRKKTMTSVYLKFFETAADGKTRRCKFCGQSYSIATATGNLGRHLANRHPGYDKSGDAVSNSASRSTVTIKKSQPQGKPNQVDYDHLNWLIVRWLVLASLPPSTLEEKWLVNSYKFLNPSIQLWPSDKYRTVLDEVFRSMREDVRALLEQVSTKLSITLDFWTSFEQIFYMSITCQWIDENWSFQKLLLDICRIPYPCGGAEIYRCLVKVLKFYNIENRVLSCTHDNSSSAILACHTLKEDLDDQKIGPFCYIPCAARTLDQIIDDGLRSTKQVISKIREFAIELNSSSVISEDFIQLSTAYQEGTWKFPLDVSPRWSGNYQMLDLFRKAGKSMDAVIRKYEDTLGSKMLLGSSDKSLGNIMHQFLEPFHKTTNDICTSKVPTVGLVLFFMDHISETIATCRESRHSPEWLKSAAEEMAKKARNYINQVCNIFTYMTAILDPRLKAELIPDSLNSESFLDEARTHFMRNYSTSHFSSMSSGYNAQEIEDGGSVSFAEEIARKKRRTSMSSTTDELTQYLSEAPAPMAIPTDVLEWWKVNSTRYPRLSMMARDFLAVQATSVVPEEIFCGKGDAIDKQRFCMPLDTTQAILCIKSWIEVGIKFKFKSTEIDYERLMELAAAAASTDNSPVSSVEKKQK* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2015 693 MobiDBLite consensus disorder prediction 108 135 - -
Lja4g2015 693 Pfam BED zinc finger 68 106 IPR003656 GO:0003677
Lja4g2015 693 SUPERFAMILY Ribonuclease H-like 197 654 IPR012337 -
Lja4g2015 693 Pfam Domain of unknown function (DUF4413) 433 513 IPR025525 GO:0003677
Lja4g2015 693 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 40 661 - -
Lja4g2015 693 MobiDBLite consensus disorder prediction 113 135 - -
Lja4g2015 693 Pfam hAT family C-terminal dimerisation region 570 652 IPR008906 GO:0046983
Lja4g2015 693 PANTHER BED FINGER-RELATED 40 661 IPR045259 -
Lja4g2015 693 SMART bed5 61 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2015 Lja-Chr4 20922645 20926057 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2015 - - lja:Lj0g3v0358949.1 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2015 4 20922645 20926057 Lja4g2015 4 20922645 20926057 ECH