Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2008 ATGGCGAAGCCTCGCAAGCCCAAGAACGAAGACTCCAAGCCTGAAAACTCCGGCGCCATCGTTCACCACCAAAAGCTCTGCCTCTCCATCGACCTCCACAAACGCCTCCTCTACGGGTACACTGAATTGAAAATCGCGGTACCGGAGATCGGAATCGTAGGGCTGCACGCGGAGAATCTAGGGATTGGAGGTGTTTGGGTTGATGGTGAGCCTACGGAGTTCGAATACTACCCGCATCAACAGCAGCAGGTGGAGGAGGATGGAAAGAGATGGAGCTCGGTGTCTTCTCCTAGCTCTGCTGCTGATGAAGCTGCGTCACTGTACTTGTCTTCTCTCGAGAAAGAACTCGTCCCCAATTTGCTCATCAACTGCTGTAAACCCTTCAAGCCTGAGACTGAACAGCAGGAGCAACCTGTTTCTGAAAATGGGTTCCACTCTGCTGAGCCTAAGCAGAATGTGAGATCTGTTCGTATTGACTATTGGGTAGAAAAGGCGGAGACAGGAATCCACTTCAGAGATAATTTGCTTCATACTGATAATCAGATAAGGAGAGCGAGGTGTTGGTTCCCTTGTATAGATGACAATTCACAGCGATGCTGCTATGACCTGGAGTTCACTGTAGCTCACAATCTTGTGGCTGTCAGTACTGGAAGCTTGCTATATCAGGTCTTAAGCAAAGACAATCCTCCTAGGAAAACATATGTCTATAAATTGGATGTTCCAGTTGCTGCAAGGTGGATATCTTTGGCTGTTGCCCCTTTTGAAATTCTTCCTGATCACCAATTTAGTCTTGTATCACATATGTGTTTGCCACCGAATCTGTCAAAGATGAGGAATACAGTGGATTTTTTCCATAGTGCCTTCAGCTGCTATAAGGATTATCTTTCTTTAGACTTCCCATTTGATTCATACAAGCAAGTTTTCATAGAGCCTGAGATGGCAGTTTCATCATTGAGTTCAGGAGCCTCTATGAGTATTCTAAGTTCTCAAGTTTTGTTTGATGAGAAGGTTATTGACCAGACTATTGATACAAGGGTCAAGCTTGCATATGCCCTTGCAAGACAGTGGTTTGGAGTGTATATCTCTCCCGAGGCACCAAATGATGAGTGGCTCTTGGAAGGGCTTGCTGGTTTCTTGACAGATTTTTTCATTAAGAAACATTTGGGAAACAATGAGGCACGGTACCTGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATAGTGGAGCGACAGCTTTGAGCTGTTCAGCTTCTTGTAAGGATTTATATGGAACACAGTCAATTGGTTTGTATGGAAAAATAAGATCATGGAAGTCTGTGGCAGTTCTTCAGATGTTGGAAAAGCAGATGGGTCCTGAATCTTTCCGTAGAATTTTGCAAACTATAGTTGCTCGAGCTCAAGATAAATCACGTTCCATGAAAACACTTAGTACTAAGGAGTTTCGACATTTCGCTAATAAGGTTGGAAATCTTGAGCGTCCATTTCTTAAAGATTTCTTCCCTCGATGGGTCGGTTCTTGTGGATGTCCTGATTTAAGAATGGGGTTCTCCTATAACAAAAGGAAGAATATGGTTGAATTGGCTGTGTTGCGGGAATGCACAGCATTGCAGGCTTCAAGTACATCCATTCTTGATATTAAACCAGATTCTGAAAATAAAGATGGAGATACTGGATGGCCTGGTATGATGAGCATACGGGTATATGAACTTGATGGTATGTATGACCATCCAATTCTACCTATGGCTGGAGAAGCATGGCAACTATTGGAAATACAATGCCATTCAAGGCTTGCTGCTAGACGCTTTCAGAAGCCTAAGAAAGGTTTAAAAATTGATGGCTCTGATGATAATGGTGATGTGCCTTCCATGGATATACGCTCGAGTACTGAGTCCCCTTTATTATGGATCAGAGCAGATCCTGACATGGAGTACCTTGCTGAGGTTCATTTTAATCAACCAGTACAGATGTGGATTAATCAATTAGAAAAGGACAAAGATGTTATTGCTCAGGCACAAGCAATTGCAGCTCTTGAAGCATCCCCCCAGTTATCGTTTTCTGTTGTGAATGCTCTAAACAATTTTCTCAGTGACTCCAAGGCTTTTTGGAGAGTAAGAATTGAAGCAGCATTTGCATTGGCAAATTCAGCATCTGAGGAAACTGATTTTTCTGGACTACTTCATTTGGTGAAATTTTACAAGAGTCGGAGGTTTGATCCTGACATAGGACTCCCAAAGCCAAATGATTTTCATGATTTTGCTGAGTATTTTGTTCTTGAGGCTATTCCACATGCTGTAGCTATGGTCAGAGCTGCCGACAAGAAAAGCCCGAGAGAGGCTATCGAGTTTGTTTTGCAGCTACTGAAGTACAATGACAACAATGGGAACCCTTACTCTGACGTCTTCTGGCTTGCTGCGTTGGTCCAGTCAGTTGGCGAGCTTGAGTTTGGGCAACAGAGTATTCTCCTATTGTCATCACTACTCAAACGTATTGACCGGCTTTTACAATTTGATAGTCTCATGCCAAGCCACAATGGAGTCTTGACTGTTAGTTGTATCCGGACATTGACCCAGATTGCTTTAAAGCTTTCAGGGTTCATTCCTCTTGATCGTGTATACGAACTCGTAAAACCTTTTCGGGACTTGAAGGCAATTTGGCAAGTTCGGATTGAAGCAAGCCGAGCACTCCTTGATCTTGAATTCCACTGCAAGAACATTGATGCAGCACTGGTTTTATTTATCAAATATGTAGAGGAGGAGCCTTCCTTAAGAGGGCAATTAAAACTGGCTACCCATATTATAAGGCTATGTCAGATGAGAGATGGATTGAATTCAAATGATGAAATTGCAAGCGAAACTCTTGTCTCTTTGCTCAGTTTACTGGAAGGGCGCATGACATTTAATAATGTCTTTCTCCGTCACTACTTGTTCTGTATACTACAAGTACTTGCAAAAAGACCTCCAACTCTACATGGGATACCCAGGGAAAATAGAACGTTGCATATGAGTCTTACAGAAGCTTGTAACTCTCAGAGGAACATACTTGTTCTTGATTTAGAAAATAAACCTTTGGAAATGCCAAGCTCTACCCTAAACATTACACAAGATTTGGCCATGACTGAGGGTTTGAGTGATGCGCTTGTTGAATCTCCAAAGGATCAAACTTGTGAAGCTCCCAAACAAGCGGATGTTGAAGCTCTAAAAGAAGCGCCTCTTGAGATTCCCAAAGAGGTCTTGATAGAATTTCAACATGAAGCGCCAATTGAAGCTCCCAATGAAGTTTCCAAGGAAGCTGATACTGTATCCAATAGCCATGAAAGGAAAAGGCCAATTAAAATCAAGGTTAAACAATCTTCTGCTACCAGTAGAGCTGATACTGATAATCAAATGGTTGAGCGTTCTTTAGGCGCTCGTAATGAAATGGATCATGGAGCTAGCAGTTCAGTTTCTGTGGATGCACCTCAGAGAAATTTTGTAGAGACTCTAAGCATCAGTAATCATAATATTGAGGAAGTGAATTCTTGCCATGATCATTGTTCTCGCATGACTGCCAGTATCGGTAGTGCAAAATTTTTGAGTAATGGTGATGAATTGGTTAAAGAGCTCCAATGCACTGCTGATTCAAGTGTTGTTCACTCACAACCGCAGCCAGAAAACCCGTCATCATCTAGTATTATCCATGATAACAATATTGATGCTGATGCACGAAGATATGTTAGCCTTCAAACTCTTTCAGCTTCAAGATTTGATGTTGATGGAGGATCATTGGGTAAAGAAATTTCTGCACGAGGGAAAGAAAAACACAAAAGCAAGGATAAGAAACGGAAGAAAGAACACCGAGATGATCCAGAGTATTTGGAGCGAAAACGTTTGAAGAAAGAGAAAAAACGCAAGGAAAAAGAGATGGCAAAACTCCAGGGTGATGCAGCAAAAAGATCCTCAGTAGACTTGTCAAGTAAAAAAGAGGAACCTGAAGTGGATGTTGCAAAACAGCTGAAATCTGTTGAACCTAGCGGGTATAATTCTCAATCAGAATTCAGAAGGATCGATGCAACCAAACCTGAGGCATCCGAAGGTACATCTGGTGCACCGAAAATTCGCATTAAAATCAAAAACCGACTGCTCAGCAAGTAA 4137 0.4225 MAKPRKPKNEDSKPENSGAIVHHQKLCLSIDLHKRLLYGYTELKIAVPEIGIVGLHAENLGIGGVWVDGEPTEFEYYPHQQQQVEEDGKRWSSVSSPSSAADEAASLYLSSLEKELVPNLLINCCKPFKPETEQQEQPVSENGFHSAEPKQNVRSVRIDYWVEKAETGIHFRDNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLVSHMCLPPNLSKMRNTVDFFHSAFSCYKDYLSLDFPFDSYKQVFIEPEMAVSSLSSGASMSILSSQVLFDEKVIDQTIDTRVKLAYALARQWFGVYISPEAPNDEWLLEGLAGFLTDFFIKKHLGNNEARYLRYKANCAVCKVDNSGATALSCSASCKDLYGTQSIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVARAQDKSRSMKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPDLRMGFSYNKRKNMVELAVLRECTALQASSTSILDIKPDSENKDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSRLAARRFQKPKKGLKIDGSDDNGDVPSMDIRSSTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSVVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPSHNGVLTVSCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKAIWQVRIEASRALLDLEFHCKNIDAALVLFIKYVEEEPSLRGQLKLATHIIRLCQMRDGLNSNDEIASETLVSLLSLLEGRMTFNNVFLRHYLFCILQVLAKRPPTLHGIPRENRTLHMSLTEACNSQRNILVLDLENKPLEMPSSTLNITQDLAMTEGLSDALVESPKDQTCEAPKQADVEALKEAPLEIPKEVLIEFQHEAPIEAPNEVSKEADTVSNSHERKRPIKIKVKQSSATSRADTDNQMVERSLGARNEMDHGASSSVSVDAPQRNFVETLSISNHNIEEVNSCHDHCSRMTASIGSAKFLSNGDELVKELQCTADSSVVHSQPQPENPSSSSIIHDNNIDADARRYVSLQTLSASRFDVDGGSLGKEISARGKEKHKSKDKKRKKEHRDDPEYLERKRLKKEKKRKEKEMAKLQGDAAKRSSVDLSSKKEEPEVDVAKQLKSVEPSGYNSQSEFRRIDATKPEASEGTSGAPKIRIKIKNRLLSK* 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2008 1378 MobiDBLite consensus disorder prediction 1315 1331 - -
Lja4g2008 1378 Pfam Peptidase family M1 domain 282 480 IPR014782 GO:0008237|GO:0008270
Lja4g2008 1378 Coils Coil 1287 1309 - -
Lja4g2008 1378 CDD M1_like_TAF2 23 506 - -
Lja4g2008 1378 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 17 1309 IPR037813 GO:0005669
Lja4g2008 1378 Gene3D Neutral Protease Domain 2 261 510 IPR027268 -
Lja4g2008 1378 MobiDBLite consensus disorder prediction 1091 1130 - -
Lja4g2008 1378 MobiDBLite consensus disorder prediction 1277 1291 - -
Lja4g2008 1378 MobiDBLite consensus disorder prediction 1253 1378 - -
Lja4g2008 1378 Gene3D tricorn interacting facor f3 domain 20 251 IPR042097 -
Lja4g2008 1378 SUPERFAMILY ARM repeat 444 986 IPR016024 -
Lja4g2008 1378 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 265 514 - -
Lja4g2008 1378 MobiDBLite consensus disorder prediction 1116 1130 - -
Lja4g2008 1378 MobiDBLite consensus disorder prediction 1207 1228 - -
Lja4g2008 1378 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 252 IPR042097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2008 Lja-Chr4 20780723 20796138 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2008 K03128 - gmx:100792795 2330.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2008 4 20780723 20796138 Lja4g2008 4 20780723 20796138 ECH