Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1852 ATGCCCACTTCAAACCTTAGCTTATCCTACACAAACCCATCATCATCAACCATGGACTGGTTCTCATGGTTATCAAGAACAAGTCTTGACCCTTCCCTCATCTATGACTATGGCCTCATCTTCGCCCGGAACGAGCTTCAATTGGAAGATGCAAGCCACTTCAACCATGAGTTTCTTCAGAGCATGGGAGTCTCAATTGCCAAGCACAGGCTAGAAATTCTCAAGCTTGTAAAGAAGGAACAAGTAGCAGCAGCAGCAAGACCAAAAAAGCTTTCTGGGGTGATCAAGAGGTATCTGAGAAAATGCATGAACAAGTTTGTTTTTCAAGAACAACTTGAAGTGAAAAAGAAGAACTTGCCTGTGTCAGTGCCAGTGCCAGTGCCAGTGACAGTGACACAACCAGAGGGTAATTGGTATCAAGAGAAGTGGAAAGGAGCAATTGTGAAGGAAGAAAGGCAAGTTCCCAAGTACAAAAGCAGGACAATAGCACTTTCAGGACCATTGGATGGAAGAATGCATGAGAAGATGATAAACCACAATAAGTCCTTGAAGCTATCTGGGCCAATTGATGGAAGAATGAATGAGAGAATGATGATGTACACTAATAGGAGTCCTTTGGTTTCTAAGCCTTTGGAAAGAAGGTTCACAGCACCAAGGAGTCCAAGAGTATCAGGGCCTCTGGATATGATGGTTGAGAATAGAACTCCAAGACTAGCAAGGCCTTCTGATGCAACAAAAGCTGAGAATGAGAACTTGATGGGTTACAGTCCTTATAACAAGCCTAAAGATGACTATGATTATGATGAGGATGATGATGATCACACACTCTGGCCTACACTGTTTCAGGATCTGAAACCAACTTGA 864 0.4306 MPTSNLSLSYTNPSSSTMDWFSWLSRTSLDPSLIYDYGLIFARNELQLEDASHFNHEFLQSMGVSIAKHRLEILKLVKKEQVAAAARPKKLSGVIKRYLRKCMNKFVFQEQLEVKKKNLPVSVPVPVPVTVTQPEGNWYQEKWKGAIVKEERQVPKYKSRTIALSGPLDGRMHEKMINHNKSLKLSGPIDGRMNERMMMYTNRSPLVSKPLERRFTAPRSPRVSGPLDMMVENRTPRLARPSDATKAENENLMGYSPYNKPKDDYDYDEDDDDHTLWPTLFQDLKPT* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1852 287 CDD SAM_superfamily 19 79 - -
Lja4g1852 287 Gene3D - 16 84 IPR013761 -
Lja4g1852 287 SUPERFAMILY SAM/Pointed domain 22 80 IPR013761 -
Lja4g1852 287 MobiDBLite consensus disorder prediction 238 271 - -
Lja4g1852 287 PANTHER STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN 18 287 - -
Lja4g1852 287 PANTHER OSJNBA0033G05.11 PROTEIN 18 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1852 Lja-Chr4 18145147 18146218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1852 - - gmx:100775936 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1852 4 18145147 18146218 Lja4g1852 4 18145147 18146218 ECH
Lja4g1852 4 18145147 18146218 Lja6g1855 6 45877263 45878243 PCT