Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1558 ATGGCGATTTCCGAAGACTCTGAATCTCTATTCGCCGCCGCCGCCGCTTCCTCCGTCATCCAAAGCGGCTCTTCCGTACGCCGCAGGCCCAGCGCTATCTCCGCCGTCGCGACAGTCGAAGACGAGAGTTCGAGTGAAGAGCCGGTGCCGGTGAGGGATTCTGGTTCCGACGTCGACGACTCCGTAAGCAGCGAGCAACACGTCTCCCCCGCCACCGCCAATCGAGAGAAGAATCAGGTGCATGACATCTCAGCCACCAAATTCGCCTACCGTCCTTCCGCCCCCGCTCATCGCAGAGTCAAGGAGAGCCCCCTCAGCTCCGACAACATTTTCCGTCAGATGCAGAGTCATGCGGGTCTCTTCAACCTTTGTATAGTTGTGCTTGTTGCAGTGAATAGCAGACTTATCATTGAGAATTTGATGAAGTATGGTTGGTTGATTAGGACTGGCTTTTGGTTTAGTTCAAAATCATTGAGGGATTGGCCACTCTTCATGTGTTGTCTCAGTCTTGCAATATTTCCTTTTGCCGCCTTTGTAGTCGAGAAGTTGGTGCAACAGAAGTGTATTTCTGAACCAGTGGTTGTTGTTCTTCATATATTCATTTCAACAGCTGCAGTTGTCTATCCAGTTTTAGTAATCCTCAGGACTGATTCTGCTTTTCCATCAGGCGTCACATTAATGTTATTTGCTTGCATTGTATGGCTAAAACTGGTGTCTTATGCACATACGAACTATGATATGAGAGAACTTACCAAATCAATTGAAAAGGGAGAAGCACTTCCCAATACTCTGAATATGGACTATTCTTATGATGTGAGCTTCAAGAGCTTGGCATACTTTATGATTGCTCCTACATTATGTTACCAGCCAAGATATCCTCGCAGTCCTTCTATCCGGAAAGGTTGGGTGCTTCGTCAACTTGTCAAGCTGATAATATTTACAGGAGTAATGGGATTTATAATAGAACAATATATTAATCCTATAGTTCAAAATTCACAGCATCCTTTGAAGGGAAACCTACTATATGCCATTGAAAGAGTTCTGAAGCTGTCTGTTCCAAACTTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCACCTTTGGTTAAATATTCTCGCAGAGCTTCTTAGATTTGGTGATCGCGAGTTCTACAAGGATTGGTGGAATGCCAAAACTTTTGAAGAGTATTGGAGGATGTGGAATATGCCTGTTCACAAATGGATGATCCGACACCTATATTTTCCATGTTTAAGAAATGGTATACCCAAGGGTGTTGCTATTTTAATTGCCTTCCTGGTTTCTGCATTGTTCCATGAGCTGTGCATTGCTGTTCCTTGCCACATTTTCAAGTTGTGGGCTTTTGGTGGAATTATGTTTCAGGTTCCTTTGATCTTGATAACAAATTATCTGCAAAATAAGTTCAGAAACTCAATGGTTGGAAACATGATTTTTTGGTTCATATTCAGTATTCTTGGTCAACCAATGGCCGTACTGCTATACTACCACGATTTGATGAATCGGAAAAGCAAACTTGACCAAAGCTAG 1548 0.436 MAISEDSESLFAAAAASSVIQSGSSVRRRPSAISAVATVEDESSSEEPVPVRDSGSDVDDSVSSEQHVSPATANREKNQVHDISATKFAYRPSAPAHRRVKESPLSSDNIFRQMQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIRTGFWFSSKSLRDWPLFMCCLSLAIFPFAAFVVEKLVQQKCISEPVVVVLHIFISTAAVVYPVLVILRTDSAFPSGVTLMLFACIVWLKLVSYAHTNYDMRELTKSIEKGEALPNTLNMDYSYDVSFKSLAYFMIAPTLCYQPRYPRSPSIRKGWVLRQLVKLIIFTGVMGFIIEQYINPIVQNSQHPLKGNLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTFEEYWRMWNMPVHKWMIRHLYFPCLRNGIPKGVAILIAFLVSALFHELCIAVPCHIFKLWAFGGIMFQVPLILITNYLQNKFRNSMVGNMIFWFIFSILGQPMAVLLYYHDLMNRKSKLDQS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1558 515 MobiDBLite consensus disorder prediction 18 76 - -
Lja4g1558 515 Pfam MBOAT, membrane-bound O-acyltransferase family 241 501 IPR004299 -
Lja4g1558 515 PIRSF Oat_ACAT_DAG_ARE 8 513 IPR014371 GO:0008374
Lja4g1558 515 PIRSF Oat_dag 3 514 IPR027251 GO:0004144|GO:0019432
Lja4g1558 515 MobiDBLite consensus disorder prediction 18 41 - -
Lja4g1558 515 MobiDBLite consensus disorder prediction 61 76 - -
Lja4g1558 515 MobiDBLite consensus disorder prediction 45 60 - -
Lja4g1558 515 PANTHER STEROL O-ACYLTRANSFERASE 17 513 IPR014371 GO:0008374
Lja4g1558 515 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 1C 17 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1558 Lja-Chr4 14555667 14562489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1558 88 512 Lipid Metabolism Gene Families AT2G19450 77.882 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1558 K11155 - gmx:548005 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1558 4 14555667 14562489 Lja4g1558 4 14555667 14562489 ECH
Lja4g1558 4 14555667 14562489 Lja6g2043 6 48892498 48901283 PCT