Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1550 ATGGCAACATCTAGCAAGTTTGATCCATCTTCCAGTAGCCCAGATAGACTATTGTACACTGGGCAGCGTGGATCCCACATAGCTTCTTCATTAGATAGATCAGGTAGCTTTCGTGAAAGTATGGAAAATCCAATTCTGTCTTCTCTTCCCAATATGTTAAGAAACAGTTCTTCAGGAACACATGAAGATGTTGAGAACTTCTTCAATTATGTCCATTTTGATCCAAAGTTGTTAGTGCTGGACCATAAGTCTAATCGTCAAATGGATTATAAGCGACTTGTTTACTCCGCTATTGGAATTTCACCTGATGAATCTTTATCTAGTTCTGCAAAAGCCAAGCTAGTGCCATCCCTGGTACCAGAAGACATCAAGCGACTCAAGGAGAGTTTGTATGCAAGCAATGTGAAGGCGAGGGAACGTGTTAAAATGTTCAGTGAGGCCTTATCTGTATTCCACCAAGTTTTCCCAACTACAACTTCAAAGAAGAGATCTCGAGCTGAAGGCTTTTCTAATGATCGTTCTAGTATCATGTCTGGGGATCGATCAGTCTTGGGGCCAAGCATGGGTAAGGTTGGAGTTCAAGGTCATCCTGTCACAGGTGGTTTTGAACATGAGCCGCAGAAGTCGGAAGAACGGACCAAAAATCTTGTTACAAATAAACGCACTCGAACTTCTATGGTGGATGTAAGGATGGATGTGCGGACTAATTCACTTGTCAGGCCATCGGGGACTATTGATAGAGATAAGGAAAAGCCACGGGTTCCCAATAGTGGTATCCTTCAGAGTGAAGAACGGACCTTACCTATTGGCGGTGATGGTTGGGAAAAGTCAAAAATGAAAAAGAAGCGCTCTTGCATCAAACTAGATGGTTCTCCAAGTACAACATTGACTAAACCTGTTAATGGTTTACAGGAAGCTAAACAGGGAATGCAACAAAGAATTGCCACTGATTCTCGGTCCAAATTGAGTAATGATTCTCATTCCTTTAGGCCAGGAGTTTCTAATGGAACTACTGGAGCTGGTAAATCAGATGGTATCTCTCAACCGACAGGATTGGGTATACGTGTCTCTACCCCTAGGAACGACCAAGATAATAATTCCCTTGTCAATGATAGGCGGGGCCGTCCTGCTAGTTCAGACAAGGAAAAGGTGAACTTCAGAGCTGTTAACAAGGCAACTGTTCGTGATGAATTTAATTCAGCTAGCCCTACCTCAAATACAAAGATGAATACCGCTATTCGGGCTCCAAGATCGGGCTCAGGAGTTGCCCCTAAGTTGTCACCAGTTGTCCATAGAACAGCTGTTCCTAATGATTGGGAGCTGGCTCATTGCGCCACAAAACCCCCTCCTAGTGTTGGTACTAACAATCGCAAACGAGTTGCATCAGCACCGTCATCTTCCCCCCCGGTTGTCCCTTGGCAGAGGCCGCAAAAGAGCTCTCGTACTGCCAGAAGAACGAATTTTGTGCCCATTGTTTCAAACAATGATGAAGCTCCTGCTTTGGATGCTGTCTCTGATGTGGCTGGTAATGATCTTGGGTTAGGATTTGCCAGACGCCTGACTGGTAGTTCTCCTCAGCGAATTAAAGTAAAAGGTGAACCCTCACCTTCAGCTGCATTATCTGAAAGTGAAGAGTCAGGGCAGGCTGAGGTTAAACCAAAAGAAAAGGGCAGGAAAGTGGAAGAAACCGATCAGAAATCTGGATTAAATGTTCCAAAGGCCTCCAACTTAGCATTGACAACAAGAAAGAATAAGCTTGCTTCGGGGGAAGAACATGGAGATGGTATTCGGAGGCAAGGGAGGACAGGACGTGGTCTTACAAGGTCATTGATGCCAATGTCATCTGAGAAGCTTGGAAATGTAGGAACTGCAAAACAACTTAGAAGTGCAAGACAAGGATCTGAGAAGAATGAAAGCAAGACTGGTCGTCCCCCAACCAGGAAACTTTCTGATCGAAAGGCATATTCACGTCAAAAGCCTACTGCTATTAATGCGGCAGCAGACTATTTTGTTGGATCAGAAGATGGACACGAAGAGCTATTGGCTGCTGTTAAGGGTGTTATCAACTCTAATCATACATTCCCCACCCCATTTTGGAAGCGGATGGAGCCTTTCTTCAGTTTGATATCTGAGGAGGACATCATTTACTGGAAGCAAAAGGTAAATCTTGAATCAAGCTCACTGGCACCAACTCCAGTTCCTTCAAATATGGATATGGGTTGTGAAACCATTGTTAATGGATATGGGTTGTTTGGCTGCAAAAGAGATGCTTGGCCTGAAGCTCCATGGAGTGCTACATTGACTACAGAACAGTTACAACTTTCCAAGAGAGATCATAATGTGATTCCACTCTGTCAAAGGGTTTTAGCTGCTTTAATCTCAGAGGAGGATTGTAGTGGTGGAAATGAAGATTTCCTGTCTGATGCTTATGATACTGAATTTGAGCCTGATGGGGAATTGGAAATGTGTGGTTTGGATCATCGCTCACGAACTAATTTTGAGTTTGCTAGTCATTCTGCTGATAATGGTTATAGGATTATTAGGAAGCCAGAACATGATGAAACTGAAAATAATATAATTGATATCCGTCCTACTGGGTTGAATTCCAGCTTTGGCAACTCAATCAATGGTTTTCTTCATGATAAAGCACTAATGTCTGGCTTGGCCCGTTCAGAGTTGCAATATGATAGCTTGGATATAAATGATAAGCTTCTCTTGGAGCTTCAAAGTATTGGACTTGCCCCAGAACCAGTGCCTGAAATGTTGCAAGCAGACGATGAAGGAATATTGGAGGATATTACTAGGTTAGAGGAACTTTTCCAAGGACAGGTTTCCAAGAAGAAAGGCATGCTGGATGGATTATTGAAATCTGCCTCAATGGAAAAAGAACTTCAAGAAAAGGAATTTGATCAACGTGCTCTAGAAAAACTCGTTTTAATGGCTTATGAGAAATACATGGCTTGTTGGGGTCCTAGTCCCTCGGGTGGGAAAAATTCAAGCAGCAGAATGGCCAAGCAAGCTGCTTTGGGATTTGTTAAACGTACATTGGACCGGTGCCATCAATTTGAAGATACAGGCAAGAGCTGCTTTAGTGAGCCGTTATTCAAGGATATGTTCCTGACTGCTTCCTCCCAGCTTAGTAACGTTCGGCTATCAGATGGAATGGAGACTGAATCCTCAAAACCATATGCTTCTCCACTTCCTCTGGAAGCAAGAACAGTTTCAATGGGTTCACAGCAGAGCCCATCACAATTTATTCAGAATATGGATAATCATGATTTCAATGCATCAGACATGCTTCCTGCTTTGAATCATTCCTCTGAACAAACTATTGGAAAGGAAGATATTTGGTCTAGCAGGGTGAAAAAGAGGGAATTGTTCCTTGATGATGTTGGTGGTACTCATGGTACTTCAAGTGCTGCAGGTGTTGGAAGTTCTCTAACAAGCAGTGCAAAGGGGAAGAGGAGTGATAGAGATGGAAAGGGGCACAGCAGAGAGGTACTATCCAGAAATGGAACTACCAAAGTTGGTAGGCCAGCATCATCCAGTGCAAAGGGAGAAAGAAAATCCAAGGCAAAGCCTAAGCAGAAAGCAACTCAGCATTCTGTTTCTGTAAATGGCCTCCTTGGCAAGCTACCAGAACAACCAAAACCAGAACGCCCTTCTGTTTCCAAGTCTAATGAACTGTGTACTAACAGCACTGCCAAAGAAAAAGATGAGTGTGGCATGGGTGGGTTGGATGAGCACGAGCCTATTGATTTGTCCAACCTGGCACTACCCGGAATGGATGACCTTACTGACCAAGGTCAGGATCTTGGTTCATGGTTGAATATTGATGACGATGCGTTACAAGATCATGACTTTATGGGCCTTGAGATTCCCATGGATGACCTTTCAGACTTGAATATGATGGTTTGA 3918 0.4354 MATSSKFDPSSSSPDRLLYTGQRGSHIASSLDRSGSFRESMENPILSSLPNMLRNSSSGTHEDVENFFNYVHFDPKLLVLDHKSNRQMDYKRLVYSAIGISPDESLSSSAKAKLVPSLVPEDIKRLKESLYASNVKARERVKMFSEALSVFHQVFPTTTSKKRSRAEGFSNDRSSIMSGDRSVLGPSMGKVGVQGHPVTGGFEHEPQKSEERTKNLVTNKRTRTSMVDVRMDVRTNSLVRPSGTIDRDKEKPRVPNSGILQSEERTLPIGGDGWEKSKMKKKRSCIKLDGSPSTTLTKPVNGLQEAKQGMQQRIATDSRSKLSNDSHSFRPGVSNGTTGAGKSDGISQPTGLGIRVSTPRNDQDNNSLVNDRRGRPASSDKEKVNFRAVNKATVRDEFNSASPTSNTKMNTAIRAPRSGSGVAPKLSPVVHRTAVPNDWELAHCATKPPPSVGTNNRKRVASAPSSSPPVVPWQRPQKSSRTARRTNFVPIVSNNDEAPALDAVSDVAGNDLGLGFARRLTGSSPQRIKVKGEPSPSAALSESEESGQAEVKPKEKGRKVEETDQKSGLNVPKASNLALTTRKNKLASGEEHGDGIRRQGRTGRGLTRSLMPMSSEKLGNVGTAKQLRSARQGSEKNESKTGRPPTRKLSDRKAYSRQKPTAINAAADYFVGSEDGHEELLAAVKGVINSNHTFPTPFWKRMEPFFSLISEEDIIYWKQKVNLESSSLAPTPVPSNMDMGCETIVNGYGLFGCKRDAWPEAPWSATLTTEQLQLSKRDHNVIPLCQRVLAALISEEDCSGGNEDFLSDAYDTEFEPDGELEMCGLDHRSRTNFEFASHSADNGYRIIRKPEHDETENNIIDIRPTGLNSSFGNSINGFLHDKALMSGLARSELQYDSLDINDKLLLELQSIGLAPEPVPEMLQADDEGILEDITRLEELFQGQVSKKKGMLDGLLKSASMEKELQEKEFDQRALEKLVLMAYEKYMACWGPSPSGGKNSSSRMAKQAALGFVKRTLDRCHQFEDTGKSCFSEPLFKDMFLTASSQLSNVRLSDGMETESSKPYASPLPLEARTVSMGSQQSPSQFIQNMDNHDFNASDMLPALNHSSEQTIGKEDIWSSRVKKRELFLDDVGGTHGTSSAAGVGSSLTSSAKGKRSDRDGKGHSREVLSRNGTTKVGRPASSSAKGERKSKAKPKQKATQHSVSVNGLLGKLPEQPKPERPSVSKSNELCTNSTAKEKDECGMGGLDEHEPIDLSNLALPGMDDLTDQGQDLGSWLNIDDDALQDHDFMGLEIPMDDLSDLNMMV* 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1550 1305 MobiDBLite consensus disorder prediction 398 414 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 162 189 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 547 566 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 613 630 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 1152 1168 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 585 601 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 1 36 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 442 491 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 398 425 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 449 463 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 366 383 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 306 383 - -
Lja4g1550 1305 PANTHER OS05G0107300 PROTEIN 1 1305 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 472 491 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 631 655 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 568 583 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 1133 1244 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 306 365 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 162 181 - -
Lja4g1550 1305 MobiDBLite consensus disorder prediction 525 658 - -
Lja4g1550 1305 PANTHER PLANT/F27B13-30 PROTEIN 1 1305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1550 Lja-Chr4 14479841 14489142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1550 - - aprc:113846392 2020.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1550 4 14479841 14489142 Lja4g1550 4 14479841 14489142 ECH
Lja4g1550 4 14479841 14489142 Lja6g2035 6 48428086 48437347 PCT