Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1541 ATGTCCGACAACGACGATCATACAGCAGACTTCACCAATGGCGAAATATCGCCTCCGAGGATGAAACAGAGGCTCAGGGATAGATCCAAGACGAAGCAAATGCTTTCTGAACAGGCGGTTAAGATCGCCAAACGAGCTGAAGAACACGAAAAGTTCATCAACAAGGTGACGCATCTTTTGGGTGTTCTTGGCTTTGGAGGGTTCTGTTTCATATTGGGGGCAAGACCCCAAGACATTCCCTATGTATATTGTTTGTTCTTCTTCATATTTGTTCCGCTTCGTTGGATATACTATAGGTTCAAGAAATGGCATTACTATCTACTGGATTTCTGCTATTATGCAAATACAATCTTCTTGGTTGATCTTCTTTGTTATCCAAGGAATGAAAAGCTTTTCATGGTTTGCTTTTCTTTTGCTGAGGGGCCATTAGCATGGGCTTTGATTGTTTGGCGCTGCAGCTTGGTTTTCAGTTCTCTCGACAAAATTGTCAGTGTTCTTATCCATCTTTTACCTGGAATTGTTTTTTTTACTATTCGGTGGTGGAATCCTGCAACCTTCGAAGCAATGCATCCAGAGGGAACTGCTCGAAGGGCTACATGGCCTTATGTTGAAGATAAATCCTATCTCTGGACATGGCTGTTTCTGGTACCCTTAGTAGTTTACTCTCTGTGGCAGCTTCTATACTTCCTCATTGTCAATGTCTTGCGCCGACAAAGGTTTCTAAGAGATCCTGAAGTAATGAATTCCTACAGGGAACTATCGAAAAAAGCTCAGAAAGCAAACAATGTATGGTGGCGCTTAAGCGGGTTGCTCGGGGATCAAAATCGCTTGCTAATGTACATTTTTCTTCAAGGCTTATTTACCGTGGCAACCATGGCACTTACTGTCCCCATATTCTTGTCATATGAATTGCATGTAGCTTTCCAAATACTCAAGGTTTCGGCTTCAATATGGAATGGAGCAAGTTTTCTGTTGGAAGTAATGCCTAGGCAGGCAATTCTGAAGGAGAAAAAGAAGTCAGAGACACAACCTTCTCAAGGTCAATTGGATCAAGCATCAATGGTGATGGAAAACGGTAGCAACGATGCTGTTGGGACATCTGATTCGTGA 1110 0.4261 MSDNDDHTADFTNGEISPPRMKQRLRDRSKTKQMLSEQAVKIAKRAEEHEKFINKVTHLLGVLGFGGFCFILGARPQDIPYVYCLFFFIFVPLRWIYYRFKKWHYYLLDFCYYANTIFLVDLLCYPRNEKLFMVCFSFAEGPLAWALIVWRCSLVFSSLDKIVSVLIHLLPGIVFFTIRWWNPATFEAMHPEGTARRATWPYVEDKSYLWTWLFLVPLVVYSLWQLLYFLIVNVLRRQRFLRDPEVMNSYRELSKKAQKANNVWWRLSGLLGDQNRLLMYIFLQGLFTVATMALTVPIFLSYELHVAFQILKVSASIWNGASFLLEVMPRQAILKEKKKSETQPSQGQLDQASMVMENGSNDAVGTSDS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1541 369 MobiDBLite consensus disorder prediction 336 369 - -
Lja4g1541 369 Pfam Protein of unknown function (DUF2838) 55 164 IPR021261 -
Lja4g1541 369 MobiDBLite consensus disorder prediction 344 369 - -
Lja4g1541 369 MobiDBLite consensus disorder prediction 1 33 - -
Lja4g1541 369 PANTHER OS01G0585100 PROTEIN 8 348 IPR021261 -
Lja4g1541 369 PANTHER - 8 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1541 Lja-Chr4 14358572 14368892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1541 - - gmx:100791853 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1541 4 14358572 14368892 Lja4g1541 4 14358572 14368892 ECH
Lja4g1541 4 14358572 14368892 Lja6g2029 6 48383753 48386774 PCT