Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1433 ATGAAGCAAAAAACGCCACCATTGATCACAGGGAGAATTGTGTTGAAGCAGAGCAGTGAAAAGTCAATACTGCCACCACCACCCCAGCAACGCTTGAGAGCGGCTAGAGAGTCTCCCAAGACACCACCTGAGGTTGTGAATAGAGTTTTGTCCATTTCATCAACCAGAGCTAAGTCTGTGCCTCCAGACTTGAAGAACAGTTCAAAGGCCAAAAGGGGTCTTGTGCTGAACAAGGCTAAGTCAATTGAAGAGGTTGAGGGGTCTCAGAAGGGTAGGGAGGGTGAAGAGGCTAAGGTTGTTGTTCTTTCTGCTGCTGCTCGGATACGGAGAAGGGTTGGGGATTTTGGTTTGAGGAGGGGTGAAGATGATCCTGATGGGAAGAATAAGAAGAAGCAAAAGGAGGTGGAGGAGGAGTTGAAGGAGAAGCTTGAGGTGAGTGAGAGCTTGATTAAGAATTTGCAGTCTGAGATGCTGGAGTTGAAGGTTGAATTGGATAAAGCTAGGAGTGTGAACATGGAGCTTGAGTCTCAGAACAGAAAGCTCACTCAGGAGCTTTCTGCTGCTGAAGCTAAGATAGCAGCACTTGGCAACAGTGTAAAGGAGCCAATTGGAGAACACCAGAGTCCCAAATTTAAAGACATTCAGAAACTCATTGCTGACAAATTGGAACGGTCTAAAGTAAAAAAGGAAACCGTTCCTGAAGCAATTTTTGTTAAAGCATCAATTCCAGCTCCAACACCAAGTCGTGCCGTTCCTGAAACTAATATAGGAAGAAAATCTCCGCCCAACCTATGCCTGCCACTGCCTCCACCACCGCCACCACCAATCCCATCTCGGCCTTTAGCAAAATTGGCTAATATCCAAAAGCCCCCTGCAATTGTGGAACTATTTCACAGCTTGAAGAATCAAGATGGAAAGAAAGACTCAAAAGGAATGGTGAATCATCAGAGACCAGTAGCTAGTAGTGCACACAGTAGCATTGTAGGAGAAATTCAAAACCGTTCAGCGCATCTTTTAGCTATAAGGGCAGACATTGAAACCAAAGGAGAGTTCATTAATGACCTTATAAAGAAGGTGGTTGATGCAGCCTACGTGGACATTGAAGAGGTCCTAAAGTTTGTTGATTGGCTTGATGGTGAACTTTCCACATTGGCTGATGAGCGCGCTGTCTTGAAGCATTTTAAGTGGCCTGAGAAGAAAGCTGATGCAATGAGAGAGGCTGCAGTTGAGTATCGTGAGCTTAAAATGTTAGAACAGGAGATTTCCTCTTTCAAGGATGACCTTGACATTCCATGTGGAGCTTCCTTGAGAAAAATGGCTTGCCTATTGGACAAGTCTGAGCGGAGCATACAGAGGCTAATCAAACTGCGAAGTTCTGCCATACGGTCATATCAAGTGTACAACATTCCAACTGCATGGATGCTTGATTCTGGAATGATGAGCAAGATAAAGCAGGCTTCCATGACTCTGGTCAAGATGTACATGAAAAGATTGACAATAGAGCTTGAATCCATTCGGAATTCAGACAGAGAATCTAGTCAAGATTCTCTTCTTCTTCAGGGAGTCCATTTTGCATATAAAGCCCATCAGTTTGCTGGTGGTTTGGACTCGGAAACGTTGTGTGCTTTTGAAGAGATAAGGCAACGCGTCCCAGGAAACCTAGCAGGGTCTCGAGAACTTTTAGCCGGCATACCATCATCATGA 1704 0.4495 MKQKTPPLITGRIVLKQSSEKSILPPPPQQRLRAARESPKTPPEVVNRVLSISSTRAKSVPPDLKNSSKAKRGLVLNKAKSIEEVEGSQKGREGEEAKVVVLSAAARIRRRVGDFGLRRGEDDPDGKNKKKQKEVEEELKEKLEVSESLIKNLQSEMLELKVELDKARSVNMELESQNRKLTQELSAAEAKIAALGNSVKEPIGEHQSPKFKDIQKLIADKLERSKVKKETVPEAIFVKASIPAPTPSRAVPETNIGRKSPPNLCLPLPPPPPPPIPSRPLAKLANIQKPPAIVELFHSLKNQDGKKDSKGMVNHQRPVASSAHSSIVGEIQNRSAHLLAIRADIETKGEFINDLIKKVVDAAYVDIEEVLKFVDWLDGELSTLADERAVLKHFKWPEKKADAMREAAVEYRELKMLEQEISSFKDDLDIPCGASLRKMACLLDKSERSIQRLIKLRSSAIRSYQVYNIPTAWMLDSGMMSKIKQASMTLVKMYMKRLTIELESIRNSDRESSQDSLLLQGVHFAYKAHQFAGGLDSETLCAFEEIRQRVPGNLAGSRELLAGIPSS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1433 567 Coils Coil 129 198 - -
Lja4g1433 567 MobiDBLite consensus disorder prediction 1 72 - -
Lja4g1433 567 PANTHER F11A17.16 1 567 - -
Lja4g1433 567 MobiDBLite consensus disorder prediction 47 62 - -
Lja4g1433 567 Coils Coil 400 420 - -
Lja4g1433 567 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 567 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1433 Lja-Chr4 12998535 13003520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1433 - - lja:Lj5g3v1157340.1 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1433 4 12998535 13003520 Lja4g1433 4 12998535 13003520 ECH
Lja4g1433 4 12998535 13003520 Lja6g1931 6 47045261 47049244 PCT