Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1405 ATGGCGGAGCTTGCTCACATCGCCCACCTACTCAACCAAACCCTCAGCCCCGACGCCACCACCGTCCGTGCCGCCACCGCCGCGCTCGATCACCTCTCCCTCACTCCCCACTTCCCCTTCCACCTCCTCTCCATTTCCGCCGGAGGAGAAAATCAAGGTCAGAAAATCGCCGCTGCTACCTACCTGAAGAACCTCACGCGCCGCAGCATCGACACCAGCGGTGCTACACCGTCGAACGTGAGCAACGAGCTCAAGGAGCAGCTGTTGCAAGCTCTGCTTCAAGTGGAGTTTCCCGTTCTCAAGATTTTGGTTGAAGTGTTCCGTGCGGTTGCTGTTGCTGATTTTGTTAAGCAGAGTTTGTGGCCGGAACTTGTGCCGAATCTGCAGTCTGCTATTCAGAATAGCCATCTTATCAGCGGCTCGAACTCGAAATGGAACACCATCAATGCACTTATTGTTCTTCATGCTCTTCTCAGACCCTTTCAGTATTTTTTGAATCCCAAAGTTCCCAAGGAGCCAGTACCACCACAGTTGGAGCTCATGGCCAAAGAAATTCTTGTGCCGTTGCTTGGTGTGTTTCATCAATTTGTTGAAAAGGCTTTAGCAAACCATGACAGAGCAGAAATAGAAACTGAAAAAGTCCTTCTAACTACATGCAAATGCCTACATTTTGCGGTAAGGTCCTACATGCCATCAACTTTAGCTCCTTTACTACCTTCATTCTGTCGGGACCTCGTGAGAATTTTGGGATCTTTGAGCTTTGATTATGCTGTCACTGAAGAAGATGGAATTTGGACACGGTTGAAGACTGGAAAAAGAAGTCTGCTTATTTTCTCTGCCCTTGTCATCCGGCACAGGAAACATTCTGATAAGTTGATGCCAGAAATTATAAATTGTGCACGAAACATAGTCAAGTTTAGCAAAAATATCAGTAAACTTCCTTTCCTATCAGAGAGGATTCTATCCCTAGGTTTTGATCTTATTTCTAATGTGCTGGAGACCGGGCCGGGATGGCGATTAGTTTCTCCACATTTTACAACTCTATTGGAATCTGCAATCTTTCCAGCATTGGTAATGAATGAGAAGGATGTGTCAGAGTGGGAAGAAGACGCAGATGAGTACATACGGAAGAATCTCCCTTCAGATATAGATGAAATTAGTGGATGGAGAGAGGATTTATTCACTGCTAGAAAAAGTGCAGGAAACTTACTTGGTGTTATTTCAATGTCAAAGGGGCCACCAATGGAGAGTGCCACTGACAGTTCTTCAGCTTCAACCAAGCGTAAAAAAGGACAAAAGAACAAAAGAAGCAATCAGCCGCGCTCCATGGGGGAGCTATTGGTGCTTCCATTTTTGTCCAAGTTTCCCATTCCTTCTGATTCCAATGTGTCTCAACCGAACATCTTAAATGATTACTTTGGCGTGCTGATGGCATATGGGGGCCTTCAAGATTTTTTGAGGGAGCAAGAATCTGCATATGTGACAACTCTGGTTAGCACGCGGATTATGCCACTGTATGCAGTAGCTGCGTCCCTACCGCACCTAACTGCAAGTGCAAACTGGGTACTTGGAGAACTAGGTTCTTGTCTACCTGAAGAGATGAGTGCTGATGTATATTCTAAATTGCTCATGGCATTGGTCATGCCAGATCAGCAAGAAACTTCTTGCTATCCTGTACGAGTTTCTGCTGCTGGGGCAATTACTACACTACTTGAGAATGACTACATGCCTCCTGATTTTCTACCTCTTCTCCAAGTCATAGTTAGCAGCATTGGAATTGATGAGAGCGAGAACTCCATCTTATTTCAGCTTCTCAGTTCTATCATGGAAGCTGCGGATGACAAAGTTGCAGTCCATATCCCACACATTGTCTCACCGTTAGTGGGTTCAGTCTCAAAATGGTTTACTGCCAGTCTAGGGCCTTGGCCTCAGGTGGTTGAACATGCAATTGCTGCTCTGGCAGTCATGAGTCAGACATGGGAAAACTCTAGGCCTGAAGAATCTGAATCAAGCGAGTCTCATGAAAAATGGACTGCAGATCAAGTGGCAATTAGCAGAGCTTTTACTGCACTCCTGCAGCAGGCTTGGCTTACACCTCTATGCACACCAGACCAACAAGACCAGAATTCTCTGCCTTCATCATGCATAGAAGATCTGTCAACTTTGCTACAGTCTGTCATACTATCTATTGATGGAAATCACATGATTCAAGAGCTTAAAGTATCCGAGTTACTGTCAGTCTGGGCTGAAATGATTGCAGAGTGGCACGCATGGGAAGAATCAGAGGATTTGTCAATTTTTGATGTGATTAAGGAAACTGTGAGCTTAAATAGCAGATATGGATTGAAAAACTTTCTTGTAAAAGATATGCCACCCCCTCCAGCTCCACCTGTGCCTGAACGTTCAATTGTTGAGGGCATTGGCACTTTTGTTAGTGAGGCCATTAAGCAATATCCTTCTGCCACATTGAGAGCTTGCTCATGTGTCCATTTATTACTACATTGCCCAACATACTCACTTGAAACTGAAGGTGTAAAGCAGTCATTGGCTATTGCTTTTACTAGTGCAGCCTTCTCTCGCTTTATAGAAGTTCAAAGCACGCCTGATTCACTTTGGAAGCCTATATTGCTTGCTATATCTTCATGCTATTTGTGTTATCCTGATATAATAGAAGGTATTCTGGAAAAAGCGGAAAAGGGAGGCGTCACTATTTGGGCATCTGCTTTATGTCATGTATCCAATAGCTCTTTTGAGGCTGGTCTGACGGCAACATCTGAGATGAAGTTAATGGTGATGACACTGGCTCGATTGATTGAGCAACTTCTGAAACAAGGGAAGTCAGGTAGTGATTCAATTCGAAACTGCTTTATTTCACTGTTGGAGGTGTCTATACGTCTGAAAGAAGCACAGGATGGGGAAGAAGATGAAGATGAAGAAGCTGAAGAGGCTGAAAATGATGACGATGGTGATGAGGACAGTGATGATGGTGACTCTGAAGATTATGATGAGGACTCTGACGTTGAGGAATATGAAGAAACAGAAGAAGAATTTCTCAATAGGTACGCCAAAGCTGCGGAGGCATTGGAAAATGGTTCATTTATTGAAGAGGGGGATGCTGAAGATGAAGAAGTGGAGGTAGAATTAGGTCAATTACTTGATGTTGATGAGCAAAAACAAGTGTTGAACTTGATATACAAATATCACCAAGGGCTCATACAAGGACAAGGTTTGCCCTCGCAGCTCATCATGAATTTCCTGAATGCCTTTCCCGGGTATGGTTTGTATTTCCAGCAATACAGCTAA 3303 0.4438 MAELAHIAHLLNQTLSPDATTVRAATAALDHLSLTPHFPFHLLSISAGGENQGQKIAAATYLKNLTRRSIDTSGATPSNVSNELKEQLLQALLQVEFPVLKILVEVFRAVAVADFVKQSLWPELVPNLQSAIQNSHLISGSNSKWNTINALIVLHALLRPFQYFLNPKVPKEPVPPQLELMAKEILVPLLGVFHQFVEKALANHDRAEIETEKVLLTTCKCLHFAVRSYMPSTLAPLLPSFCRDLVRILGSLSFDYAVTEEDGIWTRLKTGKRSLLIFSALVIRHRKHSDKLMPEIINCARNIVKFSKNISKLPFLSERILSLGFDLISNVLETGPGWRLVSPHFTTLLESAIFPALVMNEKDVSEWEEDADEYIRKNLPSDIDEISGWREDLFTARKSAGNLLGVISMSKGPPMESATDSSSASTKRKKGQKNKRSNQPRSMGELLVLPFLSKFPIPSDSNVSQPNILNDYFGVLMAYGGLQDFLREQESAYVTTLVSTRIMPLYAVAASLPHLTASANWVLGELGSCLPEEMSADVYSKLLMALVMPDQQETSCYPVRVSAAGAITTLLENDYMPPDFLPLLQVIVSSIGIDESENSILFQLLSSIMEAADDKVAVHIPHIVSPLVGSVSKWFTASLGPWPQVVEHAIAALAVMSQTWENSRPEESESSESHEKWTADQVAISRAFTALLQQAWLTPLCTPDQQDQNSLPSSCIEDLSTLLQSVILSIDGNHMIQELKVSELLSVWAEMIAEWHAWEESEDLSIFDVIKETVSLNSRYGLKNFLVKDMPPPPAPPVPERSIVEGIGTFVSEAIKQYPSATLRACSCVHLLLHCPTYSLETEGVKQSLAIAFTSAAFSRFIEVQSTPDSLWKPILLAISSCYLCYPDIIEGILEKAEKGGVTIWASALCHVSNSSFEAGLTATSEMKLMVMTLARLIEQLLKQGKSGSDSIRNCFISLLEVSIRLKEAQDGEEDEDEEAEEAENDDDGDEDSDDGDSEDYDEDSDVEEYEETEEEFLNRYAKAAEALENGSFIEEGDAEDEEVEVELGQLLDVDEQKQVLNLIYKYHQGLIQGQGLPSQLIMNFLNAFPGYGLYFQQYS* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1405 1100 PANTHER IMPORTIN-7, 8, 11 3 1098 - -
Lja4g1405 1100 SMART IBN_N_2 25 94 IPR001494 GO:0006886|GO:0031267
Lja4g1405 1100 Pfam Importin-beta N-terminal domain 25 94 IPR001494 GO:0006886|GO:0031267
Lja4g1405 1100 Coils Coil 966 986 - -
Lja4g1405 1100 MobiDBLite consensus disorder prediction 971 1015 - -
Lja4g1405 1100 SUPERFAMILY ARM repeat 1 1015 IPR016024 -
Lja4g1405 1100 Coils Coil 1007 1027 - -
Lja4g1405 1100 MobiDBLite consensus disorder prediction 968 1015 - -
Lja4g1405 1100 MobiDBLite consensus disorder prediction 407 439 - -
Lja4g1405 1100 ProSiteProfiles Importin-beta N-terminal domain profile. 25 94 IPR001494 GO:0006886|GO:0031267
Lja4g1405 1100 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 1098 - -
Lja4g1405 1100 Gene3D - 1 1037 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1405 - - aprc:113846276 1674.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1405 4 12682113 12691456 Lja4g1405 4 12682113 12691456 ECH