Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1396 ATGTCTACTAGTAGCTATATTGGAATCTCTACCATGAGACCCTGTTGTAGAATCCTAAGTAGTTGTAAAACTCCATTGCTTTCTGGGTTTTCTCCAACCAACTTTAATGATCCAACCATCTTGTCCAAATCTTGTTGTCCCAGCTCAACTCATCAACCTAGATACTATACTAGAAATACCCGGATTATAGGATACATACGTGTGATTGATCCGAATCGGAAGGTTTTTAGTGTTTCCGGTTCGAATCGGGTTAATTCTAGGAATTTTAGTAGCTCTAGTTTTTGTGTCAATTTAGGCAGTTTTAGGCCTAGGGTTGTTTCGTTGATACCGAATGTAGCGTCGAATATTAGAAACCATTCTACTTCGGTTGAATCTCATGGTAATGACACAAGCTTTGAGAAGATTTACATTCAGAGTGGTTTGAATGCAAAGCCCTTGGTATTTGAGAGGATTGAGTCTGATCAAAGTAAATTGGAGGAAGTCGCTGAAGAAAGACGTGATGGTTCGAATGTAAATATAGATAATTTGAATGATTTGGATGAGAGTAAGGTTAAGAGGGAGTTGTCTGAGATTGAAAAGGAGGCTTGGAAGTTGCTTCGAGGTGCTGTTGTCAATTACTGTGGGAATCCGGTTGGGACTGTTGCAGCTAACGATCCTGCTGACAAGCAACCGTTGAATTATGACCAAGTCTTTATCCGTGATTTTGTTCCTTCAGCGCTTGCCTTTCTGCTTAATGGTGAGGGGGAGATTGTCAAGAATTTTCTACTTCACACATTGCAATTGCAGAGTTGGGAGAAGACTGTTGACTGCTACAGCCCAGGGCAAGGGTTGATGCCAGCGAGCTTCAAAGTTCGAAGTGTCTCTCTTGATGGAAGCAATGAAGCATTTGAGGAAATTTTGGATCCCGATTTTGGTGAATCGGCTATTGGGCGTGTTGCACCTGTTGATTCGGGATTGTGGTGGATTATATTATTGAGAGCCTATGGCAAGTTAACGGGTGATTATGCATTGCAAGAGAGAGTGGATGTCCAGACGGGCATAAGACTGATTCTCAAGTTGTGTCTAACTGATGGATTTGACATGTTTCCTTCTCTACTAGTCACCGATGGTTCCTGCATGATTGATAGAAGGATGGGAATTCATGGTCACCCTCTTGAGATCCAAGCATTATTTTACTCAGCTTTACGCTCCTCTCGTGAGATGCTGATAGTGAATGATTCAACTAAGAATCTGGTGGCCGCCGTTAGTAGTCGCCTAAGTGCACTTTCCTTTCACATGAGAGAGTACTATTGGGTTGATATGAAGAAGATTAATGAAATTTATCGCTATAAGACCGAAGAGTATTCTACTGATGCTGTCAACAAGTTTAACATCTATCCAGAGCAAATTCCTTCATGGCTTGTGGACTGGATCTCTGAGGAAGGTGGATATTTCATTGGCAATTTGCAACCTGCTCATATGGACTTTAGGTTTTTCACACTCGGAAACCTTTGGACCATTGTTTCTTCTTTAGGCACAACAAAACAGAACCAGGGCATTTTGAATTTAATAGAAGCCAAATGGGATGATTTCGTTGCTCATATGCCTCTAAAGATATGTTATCCAGCGCTGGAGGGTGAGGAATGGCGTATAATCACTGGAAGTGACCCCAAGAACACCCCTTGGTCATATCATAATGGTGGGTCTTGGCCAACACTTCTCTGGCAGTTCACTTTAGCCTGCATCAAGATGGGAAGGCCTGATTTGGCACAGAAGGCGGTTGATTTAGCAGAGAAAAGGCTTTCGGAGGATAGTTGGCCAGAGTATTATGATACACGAAATGGAAGGTTTATCGGTAAGCAATCGCGGCTGATGCAGACATGGACTATTGCTGGTTTCTTGACCTCAAAGATGCTTCTAGAGAATCCAGAGAAGGCATCATTGTTGTTCTGGGAGGAGGATTTTGAGCTTCTTCAGAACTGTGTCTGCATGCTAAGCAAAGAGGCTAGAAGGAAGTGTTCCCGTTTTGCTGCAAAATCTAAGAATGCTAAGTGA 2034 0.4243 MSTSSYIGISTMRPCCRILSSCKTPLLSGFSPTNFNDPTILSKSCCPSSTHQPRYYTRNTRIIGYIRVIDPNRKVFSVSGSNRVNSRNFSSSSFCVNLGSFRPRVVSLIPNVASNIRNHSTSVESHGNDTSFEKIYIQSGLNAKPLVFERIESDQSKLEEVAEERRDGSNVNIDNLNDLDESKVKRELSEIEKEAWKLLRGAVVNYCGNPVGTVAANDPADKQPLNYDQVFIRDFVPSALAFLLNGEGEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRSVSLDGSNEAFEEILDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYALQERVDVQTGIRLILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSSREMLIVNDSTKNLVAAVSSRLSALSFHMREYYWVDMKKINEIYRYKTEEYSTDAVNKFNIYPEQIPSWLVDWISEEGGYFIGNLQPAHMDFRFFTLGNLWTIVSSLGTTKQNQGILNLIEAKWDDFVAHMPLKICYPALEGEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRPDLAQKAVDLAEKRLSEDSWPEYYDTRNGRFIGKQSRLMQTWTIAGFLTSKMLLENPEKASLLFWEEDFELLQNCVCMLSKEARRKCSRFAAKSKNAK* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1396 677 Pfam Alkaline and neutral invertase 195 636 IPR024746 GO:0033926
Lja4g1396 677 PANTHER ALKALINE/NEUTRAL INVERTASE C, MITOCHONDRIAL 5 675 - -
Lja4g1396 677 SUPERFAMILY Six-hairpin glycosidases 195 628 IPR008928 GO:0005975
Lja4g1396 677 Gene3D - 225 624 IPR012341 GO:0005975
Lja4g1396 677 PANTHER - 5 675 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1396 Lja-Chr4 12482876 12487478 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1396 - - gmx:100791877 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1396 4 12482876 12487478 Lja4g1396 4 12482876 12487478 ECH