Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1389 ATGCATTTCTTCAGTCCAGTAACTCCCGGCCAGGTCTCGTTCTTGCTCGGAATCGTTCCAGTCATTGTAGCGTGGATTTCTTCCGAGATTTTGGAGTATCGCAAAAACTCCGTCCCCTCCAAACTTAGGCTCTCGGACATCAGCTTAGTTGAAGTGCGCAGTGATGTCGTTAAAGATGAAGACAAAGAAGTTTTATTGGAGGGAGGAGCTCAACAGCCAGCTTCCCCAAAACCTCGAGGCTTAACTGCCACATCACCAATTTTCCGATTCCTTTTGATGGATGAATGTTTCCTTATTGAAAACCGTTTGACGCTTAGAGCAATGTCTGAATTTGGTCTCCTTTTAGCTTACTTTTATTTGTGCGACCGCACTGATTTCTTTGGCTCATCCAAGAAGAGTTACAATAGAGATCTCTTCCTATTTCTCTATTTTCTCCTCATCATAGTTTCAGCTGTGACTTCCTTTAAGATACATAATGACAAGTCACCATTTTCTGGGAAATCCATACTTTACTTAAATCGGCATCAGACTGAAGAATGGAAAGGCTGGATGCAGGTTTTGTTTTTGATGTACCATTACTTTGCTGCATCTGAATTCTACAATGCAATTCGTTTGTTCATTGCTGCATATGTCTGGATGACTGGATTTGGGAACTTCTCATATTATTATATTCGCAAAGATTTTAGTCTAGTAAGATTTGCTCAGATGATGTGGCGGCTTAATTTCTTGGTATTGTTCTGTTGTCTTGTACTTAACAACAGTTACATGTTATACTACATCTGCCCCATGCACACTCTTTTCACTCTTATGGTTTATGGGGCACTTGGAATTCTCAACAAGTACAATGAGATTGGCTCAGTCATTGCTGTAAAATTCATTGCTTGCTTCTTGGTTGTTGTCATACTATGGGAGATACCTGGAGTCTTTGAATGGGTTTGGAGTCCATTTACATTCATGCTCGGTTATACAGATCCTTCCAAATTGCAACTTCCCCGCTTGCATGAATGGCATTTTCGCTCAGGGCTTGATCGCTACATATGGATAATAGGAATGATTTATGCTTATTATCATCCAACTGTTGAGCGATGGATGGAGAAGTTGGAGGAAGCAGAAATCAAGCGCAGAATATCAATAAAAGCTACTGTTGTGCTGATATGCTCTGTGGTGGGTTATTTATGGTTTGAGTATATATACAAGCTCGACAAGCTCACATACAATAAATACCATCCTTATACCTCATGGATTCCCATAACGGTTTACATATGTTTGCGAAATGTTACACAAAGTCTTCGTAGCTATTCATTGACCCTTTTTGCATGGCTTGGGAAGGTTACACTGGAGACCTACATCTCCCAGATCCATATCTGGTTAAGGTCAGCTGTTCCAGATGCTCAACCCAAATTGTTGCTTTCCCTGATCCCAGACTACCCGATGTTGAACTTCATGCTTACTACTTCCATATATCTTGCAATTTCCTATAGGCTCTTCGACCTGACCAATACACTGAAAGTGGCATTTGTGCCCAGCAAAGATAACAAGCGTCTTACATCCAACTTTATTACAGCAACAACACTCTCAGTTGTTTTATATTCTCTGTCCTTTGTCTTCCTTAGGATACCTCAAATGTGGGTTTGA 1635 0.4067 MHFFSPVTPGQVSFLLGIVPVIVAWISSEILEYRKNSVPSKLRLSDISLVEVRSDVVKDEDKEVLLEGGAQQPASPKPRGLTATSPIFRFLLMDECFLIENRLTLRAMSEFGLLLAYFYLCDRTDFFGSSKKSYNRDLFLFLYFLLIIVSAVTSFKIHNDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEFYNAIRLFIAAYVWMTGFGNFSYYYIRKDFSLVRFAQMMWRLNFLVLFCCLVLNNSYMLYYICPMHTLFTLMVYGALGILNKYNEIGSVIAVKFIACFLVVVILWEIPGVFEWVWSPFTFMLGYTDPSKLQLPRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEEAEIKRRISIKATVVLICSVVGYLWFEYIYKLDKLTYNKYHPYTSWIPITVYICLRNVTQSLRSYSLTLFAWLGKVTLETYISQIHIWLRSAVPDAQPKLLLSLIPDYPMLNFMLTTSIYLAISYRLFDLTNTLKVAFVPSKDNKRLTSNFITATTLSVVLYSLSFVFLRIPQMWV* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1389 544 Pfam 10 TM Acyl Transferase domain found in Cas1p 104 515 IPR012419 -
Lja4g1389 544 PANTHER PROTEIN REDUCED WALL ACETYLATION 2 7 541 - -
Lja4g1389 544 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 7 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1389 Lja-Chr4 12440280 12445969 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1389 K03377 - gmx:100794337 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1389 4 12440280 12445969 Lja4g1389 4 12440280 12445969 ECH