Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1383 ATGCCACACTTCAAGCCCCTAACAATTTCATTCTACCTTCAAGCTCTTCTTCTCATCATGATTTCAATTCCAGCAACAATTCACTGCAGAACTTTCCTTCCAAACAGTGGAAAACTGATAGAAACAACCTGCAAGAACACACCCAACTACAATGTTTGCTTTCAGTCCCTCAAGGCAAGCCCAGGAAGTTCTGGTGCAGATGTCACAGGACTGGCTCAGATCATGGTGAGAGTGATGAAAGTGAAAATTGGACTTGGAACAGAGCAGAGGAGAGCCTTGAGTTCCTGTGCTGATAAATACAGAGCAATTTTGATAGGTGATATCCCTCAGGCCACTGAAGCTTTGCAGAAAGGGGATCCAAAATTTGCAGAAGATGGGGCTAATGATGCTGCTAATGAGGCAACTTATTGTGAAAGTGAGTTTTCTGGGAAATCACTTCTTACAAAACAGAACAATGTTATGCATGATGTTGCAGCTGTTACTGGAGCTATTGTTAGGATCAACAACATCTTATTTTATAGTGACTCATCTATACTTGGGCCGCTTTTGCTTAAAAATATTATGTTAAATAAATTTCCTTTTTACTTTATAAAAAGAAACCTTCATTAA 609 0.3941 MPHFKPLTISFYLQALLLIMISIPATIHCRTFLPNSGKLIETTCKNTPNYNVCFQSLKASPGSSGADVTGLAQIMVRVMKVKIGLGTEQRRALSSCADKYRAILIGDIPQATEALQKGDPKFAEDGANDAANEATYCESEFSGKSLLTKQNNVMHDVAAVTGAIVRINNILFYSDSSILGPLLLKNIMLNKFPFYFIKRNLH* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1383 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 167 IPR035513 -
Lja4g1383 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 20 167 - -
Lja4g1383 202 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 80 IPR006501 GO:0004857
Lja4g1383 202 TIGRFAM PME_inhib: pectinesterase inhibitor domain 86 165 IPR006501 GO:0004857
Lja4g1383 202 SMART PMEI_2 35 164 IPR006501 GO:0004857
Lja4g1383 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 166 IPR035513 -
Lja4g1383 202 CDD CIF_like 39 167 IPR034087 GO:0004857|GO:0043086
Lja4g1383 202 Pfam Plant invertase/pectin methylesterase inhibitor 39 160 IPR006501 GO:0004857
Lja4g1383 202 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 20 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1383 Lja-Chr4 12357191 12360561 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1383 - - gmx:100500640 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1383 4 12357191 12360561 Lja4g1383 4 12357191 12360561 ECH