Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1378 ATGGACGCCGACGACGGTGCGAAGAACGCGAACCTCGACGACGCACCCATGCAGATGGATTCCGGCGACTCTTCTTCTACCGCTCAAGTGAAGGACAAAGAGAAGGAGGAGCTCACAGAGACTATGAACAAATTGCACATTGAAGGATCGTCTTCTGGGAGTGGATTGCCGAACTTCAAACGAAAACCGGTTATCATCTTGGTTGTTGGCATGGCAGGAAGTGGGAAAACAACATTCATGCATAGGTTGGTTTGCCATACACATTTGTCAACCCTTCGGGGTTATGTGGTGAATCTTGACCCGGCTGTGATGACACTCCCATATGCTGCTAATATTGATATAAGAGACACTGTTAAGTACAAAGAAGTCATGAAGCAGTTCAACCTTGGCCCCAACGGTGGAATTTTGACCTCCCTGAACTTGTTTGCTACCAAATTTGATGAGGTAGTTTCTGTTATAGAAAGGCGAGCAGACCAACTTGACTATGTTCTTGTGGATACCCCTGGTCAGATTGAGATATTCACCTGGTCTGCTTCTGGTGCTATCATCACAGAAGCTTTTGCCTCCACATTTCCCACCGTAGTCACCTATGTAGTTGATACCCCTCGTTCACAAAATCCCACCACTTTCATGAGCAACATGCTGTATGCTTGTAGTATCCTCTATAAGACAAGGTTACCTCTTATCTTGGCGTTCAACAAGGTTGATGTAGCCCAACATCAGTTTGCTGTGGAGTGGATGGAAGATTTTGAGGTATTCCAACAGGCGGCAGGTTCAGATCACTCTTACTCGTCAACTTTTGCTCAGAGCCTTTCACTTGCACTAGATGAATTCTACAAGAATTTAAGATCAGTCGGAGTTTCTGCAGTTTCTGGTACAGGAATAGAAGCCTTCTTCAAGACTGTTGAAACCAGTGCAGAGGAGTACATGGAAAACTACAAGGCTGATCTGGATAAAAGACGTGAAGAGAAGCAGCGATTGGAAGAAGGCCGCAGGAAGGAGAGCATGGATAAATTGAGGATGGACATGGAGAAATCTGGTGGAGGAACTGTAGTATTAAACACTGGTTTGAAAGACAAAGAAAAGGCTAAAAGTAAAAGCAAGATGGATGAGGATGAAGATGAGGTTGAAGAGGATGAGGAAATGGATGATGATTTGGTATATACTGAAGACGAGGATGCTATTGATGAGGATGAAGATGAGATGTGA 1209 0.4458 MDADDGAKNANLDDAPMQMDSGDSSSTAQVKDKEKEELTETMNKLHIEGSSSGSGLPNFKRKPVIILVVGMAGSGKTTFMHRLVCHTHLSTLRGYVVNLDPAVMTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSQNPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHQFAVEWMEDFEVFQQAAGSDHSYSSTFAQSLSLALDEFYKNLRSVGVSAVSGTGIEAFFKTVETSAEEYMENYKADLDKRREEKQRLEEGRRKESMDKLRMDMEKSGGGTVVLNTGLKDKEKAKSKSKMDEDEDEVEEDEEMDDDLVYTEDEDAIDEDEDEM* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1378 402 PANTHER XPA-BINDING PROTEIN 1-RELATED 27 401 IPR004130 -
Lja4g1378 402 Pfam Conserved hypothetical ATP binding protein 68 306 IPR004130 -
Lja4g1378 402 Coils Coil 28 48 - -
Lja4g1378 402 Gene3D - 63 321 IPR027417 -
Lja4g1378 402 Coils Coil 362 382 - -
Lja4g1378 402 MobiDBLite consensus disorder prediction 372 402 - -
Lja4g1378 402 Coils Coil 310 330 - -
Lja4g1378 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 303 IPR027417 -
Lja4g1378 402 MobiDBLite consensus disorder prediction 357 371 - -
Lja4g1378 402 PANTHER GPN-LOOP GTPASE 27 401 - -
Lja4g1378 402 CDD GPN1 64 304 - -
Lja4g1378 402 MobiDBLite consensus disorder prediction 1 39 - -
Lja4g1378 402 MobiDBLite consensus disorder prediction 344 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1378 Lja-Chr4 12335637 12339994 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g1378 K24104 - gmx:100797318 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1378 4 12335637 12339994 Lja4g1378 4 12335637 12339994 ECH